Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A4P31645 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC6A4P31645 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC6A4P31645 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC6A4P31645 AC134407.2-201ENST00000625089 1978 ntBASIC16.57■□□□□ 0.24
SLC6A4P31645 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC6A4P31645 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SLC6A4P31645 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC6A4P31645 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SLC6A4P31645 MTHFR-217ENST00000641820 1569 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A4P31645 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 AL118508.1-201ENST00000613502 2345 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SLC6A4P31645 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC6A4P31645 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC6A4P31645 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC6A4P31645 AC004987.2-201ENST00000395959 1148 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 HAUS4P1-201ENST00000406739 1145 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC6A4P31645 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC6A4P31645 SERBP1P5-201ENST00000510079 1181 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC6A4P31645 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A4P31645 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SLC6A4P31645 AC044860.1-202ENST00000559481 777 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 AC243562.2-201ENST00000561247 970 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC6A4P31645 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC6A4P31645 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC6A4P31645 LINC02560-201ENST00000596379 459 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC6A4P31645 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A4P31645 PCDHB19P-201ENST00000570871 2371 ntBASIC16.56■□□□□ 0.24
SLC6A4P31645 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC6A4P31645 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC6A4P31645 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SLC6A4P31645 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC6A4P31645 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SLC6A4P31645 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC6A4P31645 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A4P31645 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A4P31645 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A4P31645 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC6A4P31645 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A4P31645 AC008761.3-201ENST00000624803 892 ntBASIC16.55■□□□□ 0.24
SLC6A4P31645 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC6A4P31645 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SLC6A4P31645 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SLC6A4P31645 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.55■□□□□ 0.24
SLC6A4P31645 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC6A4P31645 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms