Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF1P30408 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TM4SF1P30408 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TM4SF1P30408 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF1P30408 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TM4SF1P30408 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF1P30408 C2orf27AP3-201ENST00000434123 579 ntBASIC19.82■□□□□ 0.76
TM4SF1P30408 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 AL591846.1-201ENST00000451736 433 ntBASIC19.82■□□□□ 0.76
TM4SF1P30408 AC104306.2-201ENST00000451877 341 ntBASIC19.82■□□□□ 0.76
TM4SF1P30408 HNRNPUP1-201ENST00000554987 333 ntBASIC19.82■□□□□ 0.76
TM4SF1P30408 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC19.82■□□□□ 0.76
TM4SF1P30408 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.82■□□□□ 0.76
TM4SF1P30408 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.82■□□□□ 0.76
TM4SF1P30408 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.82■□□□□ 0.76
TM4SF1P30408 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.82■□□□□ 0.76
TM4SF1P30408 AL354718.3-201ENST00000616414 581 ntBASIC19.82■□□□□ 0.76
TM4SF1P30408 CR382287.1-201ENST00000623954 586 ntBASIC19.82■□□□□ 0.76
TM4SF1P30408 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.82■□□□□ 0.76
TM4SF1P30408 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.82■□□□□ 0.76
TM4SF1P30408 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TM4SF1P30408 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TM4SF1P30408 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.82■□□□□ 0.76
TM4SF1P30408 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TM4SF1P30408 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
TM4SF1P30408 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.81■□□□□ 0.76
TM4SF1P30408 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 AC020763.4-201ENST00000623414 4170 ntBASIC19.81■□□□□ 0.76
TM4SF1P30408 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 SLC25A24P2-201ENST00000415059 510 ntBASIC19.81■□□□□ 0.76
TM4SF1P30408 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.81■□□□□ 0.76
TM4SF1P30408 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TM4SF1P30408 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.81■□□□□ 0.76
TM4SF1P30408 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.81■□□□□ 0.76
TM4SF1P30408 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TM4SF1P30408 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TM4SF1P30408 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TM4SF1P30408 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TM4SF1P30408 PCDHB18P-201ENST00000524813 2368 ntBASIC19.8■□□□□ 0.76
TM4SF1P30408 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF1P30408 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.8■□□□□ 0.76
TM4SF1P30408 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
TM4SF1P30408 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.8■□□□□ 0.76
TM4SF1P30408 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TM4SF1P30408 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.8■□□□□ 0.76
TM4SF1P30408 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TM4SF1P30408 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF1P30408 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.8■□□□□ 0.76
TM4SF1P30408 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.8■□□□□ 0.76
TM4SF1P30408 AL021578.1-201ENST00000613646 709 ntBASIC19.8■□□□□ 0.76
TM4SF1P30408 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF1P30408 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.8■□□□□ 0.76
TM4SF1P30408 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.8■□□□□ 0.76
TM4SF1P30408 AL121723.1-201ENST00000445194 1519 ntBASIC19.8■□□□□ 0.76
TM4SF1P30408 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TM4SF1P30408 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TM4SF1P30408 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms