Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC27P30260 AP003680.1-201ENST00000598970 3660 ntBASIC18.75■□□□□ 0.59
CDC27P30260 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC27P30260 AC018892.3-201ENST00000623986 2499 ntBASIC18.75■□□□□ 0.59
CDC27P30260 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC27P30260 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDC27P30260 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.75■□□□□ 0.59
CDC27P30260 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC27P30260 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 AC069262.1-201ENST00000539058 672 ntBASIC18.75■□□□□ 0.59
CDC27P30260 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.75■□□□□ 0.59
CDC27P30260 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.75■□□□□ 0.59
CDC27P30260 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.75■□□□□ 0.59
CDC27P30260 AL133215.2-201ENST00000609242 977 ntBASIC18.75■□□□□ 0.59
CDC27P30260 MIR6080-201ENST00000617359 66 ntBASIC18.75■□□□□ 0.59
CDC27P30260 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.75■□□□□ 0.59
CDC27P30260 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
CDC27P30260 AP001282.1-201ENST00000531301 1499 ntBASIC18.75■□□□□ 0.59
CDC27P30260 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.75■□□□□ 0.59
CDC27P30260 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDC27P30260 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.74■□□□□ 0.59
CDC27P30260 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC27P30260 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC27P30260 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC27P30260 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC27P30260 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.74■□□□□ 0.59
CDC27P30260 GPALPP1-207ENST00000611650 899 ntBASIC18.74■□□□□ 0.59
CDC27P30260 AC093028.1-201ENST00000622998 982 ntBASIC18.74■□□□□ 0.59
CDC27P30260 Z92544.3-201ENST00000624747 417 ntBASIC18.74■□□□□ 0.59
CDC27P30260 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.74■□□□□ 0.59
CDC27P30260 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.74■□□□□ 0.59
CDC27P30260 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
CDC27P30260 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CDC27P30260 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.74■□□□□ 0.59
CDC27P30260 AP005117.1-202ENST00000581724 1908 ntBASIC18.74■□□□□ 0.59
CDC27P30260 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC27P30260 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDC27P30260 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDC27P30260 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.74■□□□□ 0.59
CDC27P30260 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.74■□□□□ 0.59
CDC27P30260 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC27P30260 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CDC27P30260 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.73■□□□□ 0.59
CDC27P30260 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.73■□□□□ 0.59
CDC27P30260 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.73■□□□□ 0.59
CDC27P30260 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CDC27P30260 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDC27P30260 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CDC27P30260 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDC27P30260 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.73■□□□□ 0.59
CDC27P30260 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.73■□□□□ 0.59
CDC27P30260 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.73■□□□□ 0.59
CDC27P30260 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.73■□□□□ 0.59
CDC27P30260 AC007967.4-201ENST00000614700 386 ntBASIC18.73■□□□□ 0.59
CDC27P30260 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.73■□□□□ 0.59
CDC27P30260 PRAL-201ENST00000624952 3286 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms