Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CHRNB2P17787 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CHRNB2P17787 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNB2P17787 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNB2P17787 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.14■□□□□ 0.34
CHRNB2P17787 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CHRNB2P17787 ELL2P1-201ENST00000413990 1906 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 AL136982.4-201ENST00000437689 1740 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNB2P17787 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNB2P17787 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 AL592309.1-201ENST00000443127 649 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNB2P17787 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNB2P17787 SLC25A39P2-201ENST00000537614 270 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 KRT8P23-201ENST00000560090 1207 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.14■□□□□ 0.33
CHRNB2P17787 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNB2P17787 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNB2P17787 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNB2P17787 AC105339.1-204ENST00000636249 355 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.14■□□□□ 0.33
CHRNB2P17787 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 AC018892.3-201ENST00000623986 2499 ntBASIC17.14■□□□□ 0.33
CHRNB2P17787 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNB2P17787 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CHRNB2P17787 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNB2P17787 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB2P17787 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHRNB2P17787 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB2P17787 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHRNB2P17787 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.13■□□□□ 0.33
CHRNB2P17787 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNB2P17787 RNA5SP410-201ENST00000516285 106 ntBASIC17.13■□□□□ 0.33
CHRNB2P17787 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.13■□□□□ 0.33
CHRNB2P17787 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CHRNB2P17787 AC022145.2-201ENST00000598203 171 ntBASIC17.13■□□□□ 0.33
CHRNB2P17787 AP3S2-216ENST00000617003 1561 ntBASIC17.13■□□□□ 0.33
CHRNB2P17787 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB2P17787 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB2P17787 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNB2P17787 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHRNB2P17787 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CHRNB2P17787 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNB2P17787 AC092850.2-201ENST00000623821 2697 ntBASIC17.13■□□□□ 0.33
CHRNB2P17787 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHRNB2P17787 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.12■□□□□ 0.33
CHRNB2P17787 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHRNB2P17787 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB2P17787 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNB2P17787 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB2P17787 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHRNB2P17787 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB2P17787 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNB2P17787 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNB2P17787 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CHRNB2P17787 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNB2P17787 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNB2P17787 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNB2P17787 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms