Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.3■□□□□ 0.84
ITGB4P16144 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGB4P16144 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGB4P16144 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGB4P16144 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGB4P16144 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ITGB4P16144 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.3■□□□□ 0.84
ITGB4P16144 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.3■□□□□ 0.84
ITGB4P16144 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.3■□□□□ 0.84
ITGB4P16144 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.3■□□□□ 0.84
ITGB4P16144 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ITGB4P16144 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGB4P16144 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.29■□□□□ 0.84
ITGB4P16144 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.29■□□□□ 0.84
ITGB4P16144 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ITGB4P16144 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.29■□□□□ 0.84
ITGB4P16144 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.29■□□□□ 0.84
ITGB4P16144 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ITGB4P16144 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.29■□□□□ 0.84
ITGB4P16144 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.29■□□□□ 0.84
ITGB4P16144 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.29■□□□□ 0.84
ITGB4P16144 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.29■□□□□ 0.84
ITGB4P16144 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.29■□□□□ 0.84
ITGB4P16144 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGB4P16144 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.28■□□□□ 0.84
ITGB4P16144 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.28■□□□□ 0.84
ITGB4P16144 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.28■□□□□ 0.84
ITGB4P16144 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ITGB4P16144 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.28■□□□□ 0.84
ITGB4P16144 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ITGB4P16144 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 AC145423.3-201ENST00000615987 467 ntBASIC20.28■□□□□ 0.84
ITGB4P16144 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.28■□□□□ 0.84
ITGB4P16144 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ITGB4P16144 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.28■□□□□ 0.84
ITGB4P16144 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGB4P16144 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ITGB4P16144 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ITGB4P16144 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.27■□□□□ 0.84
ITGB4P16144 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ITGB4P16144 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGB4P16144 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.27■□□□□ 0.84
ITGB4P16144 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.27■□□□□ 0.84
ITGB4P16144 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGB4P16144 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.27■□□□□ 0.84
ITGB4P16144 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.27■□□□□ 0.84
ITGB4P16144 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC20.27■□□□□ 0.84
ITGB4P16144 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGB4P16144 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.26■□□□□ 0.83
ITGB4P16144 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ITGB4P16144 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms