Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 LINC01144-201ENST00000626198 1710 ntBASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 AL353779.1-201ENST00000434793 351 ntBASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 AC244107.1-201ENST00000442033 332 ntBASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
RAB40ALP0C0E4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 FLJ38576-201ENST00000623820 2459 ntBASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.27■□□□□ 0.03
RAB40ALP0C0E4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 AL139010.1-201ENST00000454878 894 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 AC135586.1-201ENST00000539323 574 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 AC004840.1-201ENST00000636359 365 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 PCGF3-213ENST00000620529 1899 ntBASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RAB40ALP0C0E4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 AL596325.1-201ENST00000563991 1082 ntBASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 AC010336.2-201ENST00000564226 506 ntBASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 AL365330.1-201ENST00000607459 531 ntBASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB40ALP0C0E4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms