Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HOXC6P09630 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HOXC6P09630 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC6P09630 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.14■□□□□ 0.5
HOXC6P09630 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HOXC6P09630 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
HOXC6P09630 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HOXC6P09630 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 AC005229.1-201ENST00000392885 409 ntBASIC18.14■□□□□ 0.49
HOXC6P09630 TOMM22P5-201ENST00000416399 439 ntBASIC18.14■□□□□ 0.49
HOXC6P09630 AC099336.1-201ENST00000417053 1171 ntBASIC18.14■□□□□ 0.49
HOXC6P09630 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 FAM86LP-201ENST00000478302 853 ntBASIC18.14■□□□□ 0.49
HOXC6P09630 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.14■□□□□ 0.49
HOXC6P09630 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXC6P09630 AL359711.2-201ENST00000563105 872 ntBASIC18.14■□□□□ 0.49
HOXC6P09630 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 MIR6787-201ENST00000616675 61 ntBASIC18.14■□□□□ 0.49
HOXC6P09630 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
HOXC6P09630 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.14■□□□□ 0.49
HOXC6P09630 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HOXC6P09630 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC6P09630 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXC6P09630 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HOXC6P09630 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXC6P09630 KRT8P37-201ENST00000451609 1420 ntBASIC18.14■□□□□ 0.49
HOXC6P09630 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
HOXC6P09630 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HOXC6P09630 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HOXC6P09630 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC6P09630 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HOXC6P09630 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC6P09630 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC6P09630 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC6P09630 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC6P09630 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC6P09630 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HOXC6P09630 TDH-203ENST00000531764 1110 ntBASIC18.13■□□□□ 0.49
HOXC6P09630 AC243562.2-201ENST00000561247 970 ntBASIC18.13■□□□□ 0.49
HOXC6P09630 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.13■□□□□ 0.49
HOXC6P09630 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HOXC6P09630 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.13■□□□□ 0.49
HOXC6P09630 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
HOXC6P09630 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
HOXC6P09630 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.12■□□□□ 0.49
HOXC6P09630 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 AC245100.3-201ENST00000441281 285 ntBASIC18.12■□□□□ 0.49
HOXC6P09630 RPL7P3-201ENST00000441388 714 ntBASIC18.12■□□□□ 0.49
HOXC6P09630 TARDBPP1-201ENST00000442013 1203 ntBASIC18.12■□□□□ 0.49
HOXC6P09630 AL355994.2-201ENST00000447882 704 ntBASIC18.12■□□□□ 0.49
HOXC6P09630 CSF2RBP1-201ENST00000447905 391 ntBASIC18.12■□□□□ 0.49
HOXC6P09630 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 AP000812.2-201ENST00000538934 718 ntBASIC18.12■□□□□ 0.49
HOXC6P09630 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC6P09630 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC6P09630 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.12■□□□□ 0.49
HOXC6P09630 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.12■□□□□ 0.49
HOXC6P09630 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HOXC6P09630 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms