Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
APOA4P06727 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.29■□□□□ 0.2
APOA4P06727 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.29■□□□□ 0.2
APOA4P06727 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 AC092474.2-201ENST00000424288 719 ntBASIC16.29■□□□□ 0.2
APOA4P06727 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.29■□□□□ 0.2
APOA4P06727 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.29■□□□□ 0.2
APOA4P06727 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.29■□□□□ 0.2
APOA4P06727 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.29■□□□□ 0.2
APOA4P06727 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.29■□□□□ 0.2
APOA4P06727 AP002472.1-201ENST00000577490 586 ntBASIC16.29■□□□□ 0.2
APOA4P06727 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
APOA4P06727 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.29■□□□□ 0.2
APOA4P06727 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOA4P06727 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
APOA4P06727 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
APOA4P06727 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.28■□□□□ 0.2
APOA4P06727 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 AC022532.1-201ENST00000624563 1728 ntBASIC16.28■□□□□ 0.2
APOA4P06727 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
APOA4P06727 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.28■□□□□ 0.2
APOA4P06727 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.28■□□□□ 0.2
APOA4P06727 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.28■□□□□ 0.2
APOA4P06727 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 AC004832.2-201ENST00000426397 482 ntBASIC16.28■□□□□ 0.2
APOA4P06727 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.28■□□□□ 0.2
APOA4P06727 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.28■□□□□ 0.2
APOA4P06727 KRT18P34-201ENST00000488218 1270 ntBASIC16.28■□□□□ 0.2
APOA4P06727 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
APOA4P06727 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.28■□□□□ 0.2
APOA4P06727 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
APOA4P06727 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.28■□□□□ 0.2
APOA4P06727 AL671883.3-201ENST00000603274 991 ntBASIC16.28■□□□□ 0.2
APOA4P06727 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.28■□□□□ 0.2
APOA4P06727 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
APOA4P06727 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
APOA4P06727 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.28■□□□□ 0.2
APOA4P06727 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.28■□□□□ 0.2
APOA4P06727 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOA4P06727 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
APOA4P06727 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.27■□□□□ 0.2
APOA4P06727 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 AC103702.1-201ENST00000548801 2630 ntBASIC16.27■□□□□ 0.2
APOA4P06727 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.27■□□□□ 0.2
APOA4P06727 MCCD1P2-201ENST00000423228 335 ntBASIC16.27■□□□□ 0.2
APOA4P06727 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
APOA4P06727 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
APOA4P06727 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.27■□□□□ 0.2
APOA4P06727 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.27■□□□□ 0.2
APOA4P06727 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.27■□□□□ 0.2
APOA4P06727 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.27■□□□□ 0.2
APOA4P06727 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
APOA4P06727 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APOA4P06727 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
APOA4P06727 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.27■□□□□ 0.19
APOA4P06727 AC005622.1-201ENST00000636801 1703 ntBASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms