Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AC139530.3-201ENST00000620344 690 ntBASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AL136982.4-201ENST00000437689 1740 ntBASIC16.41■□□□□ 0.22
HLA-DQB2P05538 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 AP001282.1-201ENST00000531301 1499 ntBASIC16.41■□□□□ 0.22
HLA-DQB2P05538 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB2P05538 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 AC018529.1-201ENST00000613063 361 ntBASIC16.4■□□□□ 0.22
HLA-DQB2P05538 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB2P05538 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-DQB2P05538 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-DQB2P05538 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 AL691432.1-201ENST00000596308 1422 ntBASIC16.39■□□□□ 0.21
HLA-DQB2P05538 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 BANF1P1-201ENST00000553684 263 ntBASIC16.39■□□□□ 0.21
HLA-DQB2P05538 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DQB2P05538 AP001160.2-201ENST00000596071 487 ntBASIC16.39■□□□□ 0.21
HLA-DQB2P05538 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms