Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.35■□□□□ 0.69
POLR3DP05423 TEX28P1-201ENST00000613479 1221 ntBASIC19.35■□□□□ 0.69
POLR3DP05423 TEX28P2-201ENST00000617764 1221 ntBASIC19.35■□□□□ 0.69
POLR3DP05423 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR3DP05423 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.35■□□□□ 0.69
POLR3DP05423 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.35■□□□□ 0.69
POLR3DP05423 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
POLR3DP05423 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR3DP05423 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
POLR3DP05423 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR3DP05423 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR3DP05423 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR3DP05423 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR3DP05423 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.34■□□□□ 0.69
POLR3DP05423 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 MIR661-201ENST00000384842 89 ntBASIC19.34■□□□□ 0.69
POLR3DP05423 AL035633.1-201ENST00000406139 838 ntBASIC19.34■□□□□ 0.69
POLR3DP05423 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.34■□□□□ 0.69
POLR3DP05423 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.34■□□□□ 0.69
POLR3DP05423 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
POLR3DP05423 AL079307.3-201ENST00000556114 283 ntBASIC19.34■□□□□ 0.69
POLR3DP05423 LINC02560-201ENST00000596379 459 ntBASIC19.34■□□□□ 0.69
POLR3DP05423 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.34■□□□□ 0.69
POLR3DP05423 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
POLR3DP05423 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.33■□□□□ 0.69
POLR3DP05423 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
POLR3DP05423 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.33■□□□□ 0.69
POLR3DP05423 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
POLR3DP05423 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
POLR3DP05423 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
POLR3DP05423 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
POLR3DP05423 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
POLR3DP05423 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
POLR3DP05423 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.33■□□□□ 0.68
POLR3DP05423 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.33■□□□□ 0.68
POLR3DP05423 TERF1P3-201ENST00000505638 1227 ntBASIC19.33■□□□□ 0.68
POLR3DP05423 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 AC026979.3-201ENST00000607315 403 ntBASIC19.33■□□□□ 0.68
POLR3DP05423 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.33■□□□□ 0.68
POLR3DP05423 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.33■□□□□ 0.68
POLR3DP05423 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
POLR3DP05423 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.33■□□□□ 0.68
POLR3DP05423 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.33■□□□□ 0.68
POLR3DP05423 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.32■□□□□ 0.68
POLR3DP05423 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 AC022144.1-201ENST00000602255 1580 ntBASIC19.32■□□□□ 0.68
POLR3DP05423 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.32■□□□□ 0.68
POLR3DP05423 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
POLR3DP05423 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms