Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.74□□□□□ -0.05
HMGN1P05114 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGN1P05114 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 MIR1199-201ENST00000621445 119 ntBASIC14.74□□□□□ -0.05
HMGN1P05114 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGN1P05114 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGN1P05114 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.74□□□□□ -0.05
HMGN1P05114 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 AC013268.4-201ENST00000637413 2228 ntBASIC14.74□□□□□ -0.05
HMGN1P05114 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HMGN1P05114 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HMGN1P05114 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.74□□□□□ -0.05
HMGN1P05114 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HMGN1P05114 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HMGN1P05114 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGN1P05114 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGN1P05114 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.73□□□□□ -0.05
HMGN1P05114 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HMGN1P05114 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HMGN1P05114 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 MRPL20P1-201ENST00000400819 433 ntBASIC14.73□□□□□ -0.05
HMGN1P05114 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.73□□□□□ -0.05
HMGN1P05114 PMS2P4-201ENST00000412466 1052 ntBASIC14.73□□□□□ -0.05
HMGN1P05114 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.73□□□□□ -0.05
HMGN1P05114 SAPCD2P3-201ENST00000455031 850 ntBASIC14.73□□□□□ -0.05
HMGN1P05114 OR7E14P-202ENST00000530490 1290 ntBASIC14.73□□□□□ -0.05
HMGN1P05114 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.73□□□□□ -0.05
HMGN1P05114 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.73□□□□□ -0.05
HMGN1P05114 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGN1P05114 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HMGN1P05114 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 TMBIM7P-203ENST00000641617 1718 ntBASIC14.72□□□□□ -0.05
HMGN1P05114 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 AC020658.6-201ENST00000623564 1870 ntBASIC14.72□□□□□ -0.05
HMGN1P05114 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HMGN1P05114 PPT1-215ENST00000641471 2368 ntBASIC14.72□□□□□ -0.05
HMGN1P05114 RNU1-129P-201ENST00000384064 167 ntBASIC14.72□□□□□ -0.05
HMGN1P05114 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 U1.21-201ENST00000580816 167 ntBASIC14.72□□□□□ -0.05
HMGN1P05114 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
HMGN1P05114 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HMGN1P05114 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGN1P05114 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HMGN1P05114 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms