Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.84■□□□□ 0.29
IFNB1P01574 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
IFNB1P01574 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IFNB1P01574 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IFNB1P01574 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
IFNB1P01574 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
IFNB1P01574 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
IFNB1P01574 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
IFNB1P01574 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IFNB1P01574 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IFNB1P01574 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
IFNB1P01574 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.83■□□□□ 0.28
IFNB1P01574 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.83■□□□□ 0.28
IFNB1P01574 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.83■□□□□ 0.28
IFNB1P01574 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
IFNB1P01574 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.83■□□□□ 0.28
IFNB1P01574 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 AL450487.1-201ENST00000426799 995 ntBASIC16.83■□□□□ 0.28
IFNB1P01574 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.83■□□□□ 0.28
IFNB1P01574 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
IFNB1P01574 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.83■□□□□ 0.28
IFNB1P01574 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.83■□□□□ 0.28
IFNB1P01574 AC093909.1-201ENST00000504731 1122 ntBASIC16.83■□□□□ 0.28
IFNB1P01574 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.83■□□□□ 0.28
IFNB1P01574 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.83■□□□□ 0.28
IFNB1P01574 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 AC144831.1-201ENST00000573312 2656 ntBASIC16.83■□□□□ 0.28
IFNB1P01574 MIR3909-201ENST00000579518 119 ntBASIC16.83■□□□□ 0.28
IFNB1P01574 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.83■□□□□ 0.28
IFNB1P01574 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.83■□□□□ 0.28
IFNB1P01574 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IFNB1P01574 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNB1P01574 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNB1P01574 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
IFNB1P01574 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IFNB1P01574 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNB1P01574 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNB1P01574 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.82■□□□□ 0.28
IFNB1P01574 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.82■□□□□ 0.28
IFNB1P01574 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 AC104692.2-201ENST00000603054 253 ntBASIC16.82■□□□□ 0.28
IFNB1P01574 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.82■□□□□ 0.28
IFNB1P01574 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IFNB1P01574 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
IFNB1P01574 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IFNB1P01574 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
IFNB1P01574 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 AC092384.3-202ENST00000564646 2873 ntBASIC16.81■□□□□ 0.28
IFNB1P01574 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
IFNB1P01574 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
IFNB1P01574 MRPL3P1-201ENST00000400109 1033 ntBASIC16.81■□□□□ 0.28
IFNB1P01574 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.81■□□□□ 0.28
IFNB1P01574 RNA5SP415-201ENST00000517246 115 ntBASIC16.81■□□□□ 0.28
IFNB1P01574 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
IFNB1P01574 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.81■□□□□ 0.28
IFNB1P01574 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.81■□□□□ 0.28
IFNB1P01574 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms