Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TIMP1P01033 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TIMP1P01033 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TIMP1P01033 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TIMP1P01033 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.27■□□□□ 0.35
TIMP1P01033 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.27■□□□□ 0.35
TIMP1P01033 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TIMP1P01033 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TIMP1P01033 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.27■□□□□ 0.35
TIMP1P01033 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.27■□□□□ 0.35
TIMP1P01033 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TIMP1P01033 AL592424.1-201ENST00000563624 1536 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TIMP1P01033 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
TIMP1P01033 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 MIR663B-201ENST00000408361 115 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 FAM197Y7-201ENST00000432892 766 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.26■□□□□ 0.35
TIMP1P01033 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 PHKG1P2-201ENST00000457537 863 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.26■□□□□ 0.35
TIMP1P01033 POU5F1P6-201ENST00000466990 990 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 AC091804.1-201ENST00000486888 567 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.26■□□□□ 0.35
TIMP1P01033 AC078819.1-201ENST00000547454 765 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 AC012085.1-201ENST00000548270 765 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 MIR4741-201ENST00000579822 90 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.26■□□□□ 0.35
TIMP1P01033 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.26■□□□□ 0.35
TIMP1P01033 AC005695.3-201ENST00000614522 232 ntBASIC17.26■□□□□ 0.35
TIMP1P01033 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.26■□□□□ 0.35
TIMP1P01033 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.26■□□□□ 0.35
TIMP1P01033 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
TIMP1P01033 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TIMP1P01033 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TIMP1P01033 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMP1P01033 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TIMP1P01033 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 AHCYP2-201ENST00000430630 1300 ntBASIC17.25■□□□□ 0.35
TIMP1P01033 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TIMP1P01033 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 AL662890.1-201ENST00000396818 632 ntBASIC17.25■□□□□ 0.35
TIMP1P01033 FNTAP2-201ENST00000430308 634 ntBASIC17.25■□□□□ 0.35
TIMP1P01033 AC005077.2-201ENST00000449786 690 ntBASIC17.25■□□□□ 0.35
TIMP1P01033 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.25■□□□□ 0.35
TIMP1P01033 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.25■□□□□ 0.35
TIMP1P01033 AP006547.1-201ENST00000563435 692 ntBASIC17.25■□□□□ 0.35
TIMP1P01033 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.25■□□□□ 0.35
TIMP1P01033 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TIMP1P01033 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.25■□□□□ 0.35
TIMP1P01033 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.25■□□□□ 0.35
TIMP1P01033 AC138951.2-201ENST00000623455 1161 ntBASIC17.25■□□□□ 0.35
TIMP1P01033 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TIMP1P01033 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TIMP1P01033 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.25■□□□□ 0.35
TIMP1P01033 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TIMP1P01033 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.24■□□□□ 0.35
TIMP1P01033 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.24■□□□□ 0.35
TIMP1P01033 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TIMP1P01033 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms