Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
SNX4O95219 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SNX4O95219 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNX4O95219 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNX4O95219 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX4O95219 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX4O95219 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
SNX4O95219 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX4O95219 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX4O95219 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
SNX4O95219 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNX4O95219 AL009183.1-201ENST00000603760 355 ntBASIC15.31■□□□□ 0.04
SNX4O95219 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SNX4O95219 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 AL691403.2-201ENST00000618460 490 ntBASIC15.31■□□□□ 0.04
SNX4O95219 AC092902.6-201ENST00000641783 218 ntBASIC15.31■□□□□ 0.04
SNX4O95219 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNX4O95219 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 AC092919.2-201ENST00000623631 1645 ntBASIC15.31■□□□□ 0.04
SNX4O95219 AC006277.1-201ENST00000624348 1610 ntBASIC15.31■□□□□ 0.04
SNX4O95219 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX4O95219 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX4O95219 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX4O95219 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.31■□□□□ 0.04
SNX4O95219 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SNX4O95219 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX4O95219 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX4O95219 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SNX4O95219 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SNX4O95219 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SNX4O95219 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.3■□□□□ 0.04
SNX4O95219 RNU1-129P-201ENST00000384064 167 ntBASIC15.3■□□□□ 0.04
SNX4O95219 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
SNX4O95219 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.3■□□□□ 0.04
SNX4O95219 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.3■□□□□ 0.04
SNX4O95219 U1.21-201ENST00000580816 167 ntBASIC15.3■□□□□ 0.04
SNX4O95219 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.3■□□□□ 0.04
SNX4O95219 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.3■□□□□ 0.04
SNX4O95219 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 AC055717.3-201ENST00000622967 595 ntBASIC15.3■□□□□ 0.04
SNX4O95219 AC006058.4-201ENST00000624016 1670 ntBASIC15.3■□□□□ 0.04
SNX4O95219 LINC00895-201ENST00000629028 1637 ntBASIC15.3■□□□□ 0.04
SNX4O95219 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SNX4O95219 AC134684.3-201ENST00000641758 218 ntBASIC15.3■□□□□ 0.04
SNX4O95219 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNX4O95219 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SNX4O95219 AC126755.1-201ENST00000525846 6405 ntBASIC15.29■□□□□ 0.04
SNX4O95219 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNX4O95219 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms