Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CSPG5O95196 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CSPG5O95196 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG5O95196 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
CSPG5O95196 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CSPG5O95196 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CSPG5O95196 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
CSPG5O95196 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CSPG5O95196 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG5O95196 SERBP1P3-201ENST00000459980 809 ntBASIC17.39■□□□□ 0.37
CSPG5O95196 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CSPG5O95196 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.39■□□□□ 0.37
CSPG5O95196 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
CSPG5O95196 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG5O95196 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.39■□□□□ 0.37
CSPG5O95196 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
CSPG5O95196 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.39■□□□□ 0.37
CSPG5O95196 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.39■□□□□ 0.37
CSPG5O95196 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CSPG5O95196 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.39■□□□□ 0.37
CSPG5O95196 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CSPG5O95196 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSPG5O95196 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
CSPG5O95196 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.38■□□□□ 0.37
CSPG5O95196 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.38■□□□□ 0.37
CSPG5O95196 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CSPG5O95196 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.38■□□□□ 0.37
CSPG5O95196 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.38■□□□□ 0.37
CSPG5O95196 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CSPG5O95196 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.38■□□□□ 0.37
CSPG5O95196 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.38■□□□□ 0.37
CSPG5O95196 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.38■□□□□ 0.37
CSPG5O95196 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CSPG5O95196 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.38■□□□□ 0.37
CSPG5O95196 AL033527.5-202ENST00000641632 1098 ntBASIC17.38■□□□□ 0.37
CSPG5O95196 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CSPG5O95196 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CSPG5O95196 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.38■□□□□ 0.37
CSPG5O95196 SNX33P1-201ENST00000592116 1762 ntBASIC17.38■□□□□ 0.37
CSPG5O95196 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSPG5O95196 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.38■□□□□ 0.37
CSPG5O95196 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG5O95196 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG5O95196 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG5O95196 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG5O95196 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSPG5O95196 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.37■□□□□ 0.37
CSPG5O95196 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSPG5O95196 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.37■□□□□ 0.37
CSPG5O95196 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms