Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
KDM4BO94953 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.34□□□□□ -0.11
KDM4BO94953 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KDM4BO94953 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.33□□□□□ -0.11
KDM4BO94953 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KDM4BO94953 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
KDM4BO94953 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
KDM4BO94953 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
KDM4BO94953 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.33□□□□□ -0.11
KDM4BO94953 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KDM4BO94953 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KDM4BO94953 PCDHA3-202ENST00000532566 4594 ntBASIC14.33□□□□□ -0.11
KDM4BO94953 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
KDM4BO94953 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.33□□□□□ -0.12
KDM4BO94953 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 SCARNA2-201ENST00000458748 420 ntBASIC14.33□□□□□ -0.12
KDM4BO94953 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.33□□□□□ -0.12
KDM4BO94953 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.33□□□□□ -0.12
KDM4BO94953 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.33□□□□□ -0.12
KDM4BO94953 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 PRELID1P1-202ENST00000567272 903 ntBASIC14.33□□□□□ -0.12
KDM4BO94953 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 MTDHP4-201ENST00000600287 670 ntBASIC14.33□□□□□ -0.12
KDM4BO94953 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 CICP4-201ENST00000447359 2812 ntBASIC14.33□□□□□ -0.12
KDM4BO94953 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.33□□□□□ -0.12
KDM4BO94953 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KDM4BO94953 AP005117.1-202ENST00000581724 1908 ntBASIC14.33□□□□□ -0.12
KDM4BO94953 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
KDM4BO94953 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
KDM4BO94953 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
KDM4BO94953 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
KDM4BO94953 AC013268.4-201ENST00000637413 2228 ntBASIC14.32□□□□□ -0.12
KDM4BO94953 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.32□□□□□ -0.12
KDM4BO94953 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
KDM4BO94953 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.32□□□□□ -0.12
KDM4BO94953 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 AF228730.7-201ENST00000641842 219 ntBASIC14.32□□□□□ -0.12
KDM4BO94953 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.32□□□□□ -0.12
KDM4BO94953 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KDM4BO94953 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms