Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.53□□□□□ -0.08
ZIC3O60481 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.53□□□□□ -0.08
ZIC3O60481 HIST3H2BA-201ENST00000436555 524 ntBASIC14.53□□□□□ -0.08
ZIC3O60481 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.53□□□□□ -0.08
ZIC3O60481 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.53□□□□□ -0.08
ZIC3O60481 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 AL844908.2-201ENST00000609461 460 ntBASIC14.53□□□□□ -0.08
ZIC3O60481 AJ011932.1-201ENST00000621707 465 ntBASIC14.53□□□□□ -0.08
ZIC3O60481 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 AL033527.5-202ENST00000641632 1098 ntBASIC14.53□□□□□ -0.08
ZIC3O60481 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
ZIC3O60481 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZIC3O60481 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 AC134407.2-201ENST00000625089 1978 ntBASIC14.53□□□□□ -0.08
ZIC3O60481 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZIC3O60481 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.52□□□□□ -0.08
ZIC3O60481 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
ZIC3O60481 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.52□□□□□ -0.08
ZIC3O60481 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC3O60481 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC3O60481 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.52□□□□□ -0.08
ZIC3O60481 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC3O60481 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.52□□□□□ -0.08
ZIC3O60481 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
ZIC3O60481 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZIC3O60481 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.52□□□□□ -0.08
ZIC3O60481 CROCCP1-201ENST00000426910 5675 ntBASIC14.52□□□□□ -0.08
ZIC3O60481 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZIC3O60481 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC3O60481 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.52□□□□□ -0.09
ZIC3O60481 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.52□□□□□ -0.09
ZIC3O60481 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC3O60481 FO393414.2-201ENST00000405153 598 ntBASIC14.52□□□□□ -0.09
ZIC3O60481 EEF1DP4-201ENST00000446006 880 ntBASIC14.52□□□□□ -0.09
ZIC3O60481 AC009477.1-201ENST00000452936 217 ntBASIC14.52□□□□□ -0.09
ZIC3O60481 UGT1A2P-201ENST00000454886 866 ntBASIC14.52□□□□□ -0.09
ZIC3O60481 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC3O60481 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.52□□□□□ -0.09
ZIC3O60481 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.52□□□□□ -0.09
ZIC3O60481 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC3O60481 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC3O60481 AL512361.1-201ENST00000554200 418 ntBASIC14.52□□□□□ -0.09
ZIC3O60481 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ZIC3O60481 AC009407.1-201ENST00000568958 598 ntBASIC14.52□□□□□ -0.09
ZIC3O60481 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.52□□□□□ -0.09
ZIC3O60481 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.52□□□□□ -0.09
ZIC3O60481 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.52□□□□□ -0.09
ZIC3O60481 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZIC3O60481 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ZIC3O60481 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ZIC3O60481 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms