Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCA5O60264 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCA5O60264 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCA5O60264 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMARCA5O60264 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SMARCA5O60264 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCA5O60264 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCA5O60264 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.99■□□□□ 0.79
SMARCA5O60264 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMARCA5O60264 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.99■□□□□ 0.79
SMARCA5O60264 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.98■□□□□ 0.79
SMARCA5O60264 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCA5O60264 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMARCA5O60264 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.98■□□□□ 0.79
SMARCA5O60264 MIR1233-2-201ENST00000408138 82 ntBASIC19.98■□□□□ 0.79
SMARCA5O60264 MIR1233-1-201ENST00000408722 82 ntBASIC19.98■□□□□ 0.79
SMARCA5O60264 RBPMS2P1-201ENST00000437762 623 ntBASIC19.98■□□□□ 0.79
SMARCA5O60264 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.98■□□□□ 0.79
SMARCA5O60264 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.98■□□□□ 0.79
SMARCA5O60264 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 AC004835.2-201ENST00000603762 682 ntBASIC19.98■□□□□ 0.79
SMARCA5O60264 AL691403.2-201ENST00000618460 490 ntBASIC19.98■□□□□ 0.79
SMARCA5O60264 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMARCA5O60264 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 AL136982.4-201ENST00000437689 1740 ntBASIC19.98■□□□□ 0.79
SMARCA5O60264 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCA5O60264 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SMARCA5O60264 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SMARCA5O60264 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
SMARCA5O60264 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.98■□□□□ 0.79
SMARCA5O60264 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.98■□□□□ 0.79
SMARCA5O60264 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SMARCA5O60264 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SMARCA5O60264 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMARCA5O60264 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCA5O60264 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCA5O60264 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
SMARCA5O60264 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.97■□□□□ 0.79
SMARCA5O60264 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.97■□□□□ 0.79
SMARCA5O60264 AP006288.1-201ENST00000446065 395 ntBASIC19.97■□□□□ 0.79
SMARCA5O60264 ALG1L8P-201ENST00000533887 760 ntBASIC19.97■□□□□ 0.79
SMARCA5O60264 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 RARRES2P9-201ENST00000565168 469 ntBASIC19.97■□□□□ 0.79
SMARCA5O60264 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMARCA5O60264 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMARCA5O60264 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 AL162727.3-201ENST00000635661 2787 ntBASIC19.96■□□□□ 0.79
SMARCA5O60264 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMARCA5O60264 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SMARCA5O60264 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCA5O60264 SPDYE14P-201ENST00000442619 822 ntBASIC19.96■□□□□ 0.79
SMARCA5O60264 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.96■□□□□ 0.79
SMARCA5O60264 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms