Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.89■□□□□ 0.13
PEX1O43933 AC006504.4-201ENST00000592118 1568 ntBASIC15.89■□□□□ 0.13
PEX1O43933 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.89■□□□□ 0.13
PEX1O43933 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.89■□□□□ 0.13
PEX1O43933 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PEX1O43933 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.89■□□□□ 0.13
PEX1O43933 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 KRT18P3-201ENST00000451602 1288 ntBASIC15.89■□□□□ 0.13
PEX1O43933 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 AC092865.5-201ENST00000545435 363 ntBASIC15.89■□□□□ 0.13
PEX1O43933 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.89■□□□□ 0.13
PEX1O43933 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 AC006538.3-201ENST00000612495 578 ntBASIC15.89■□□□□ 0.13
PEX1O43933 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 AC097637.2-201ENST00000624096 1997 ntBASIC15.89■□□□□ 0.13
PEX1O43933 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PEX1O43933 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PEX1O43933 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.89■□□□□ 0.13
PEX1O43933 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PEX1O43933 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 AC006449.6-201ENST00000612330 2296 ntBASIC15.88■□□□□ 0.13
PEX1O43933 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 ELK2BP-201ENST00000415014 1224 ntBASIC15.88■□□□□ 0.13
PEX1O43933 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
PEX1O43933 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 AC108751.1-201ENST00000490852 363 ntBASIC15.88■□□□□ 0.13
PEX1O43933 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 AL139424.1-201ENST00000607572 797 ntBASIC15.88■□□□□ 0.13
PEX1O43933 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
PEX1O43933 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
PEX1O43933 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.88■□□□□ 0.13
PEX1O43933 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PEX1O43933 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
PEX1O43933 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.87■□□□□ 0.13
PEX1O43933 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PEX1O43933 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PEX1O43933 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PEX1O43933 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms