Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.23■□□□□ 0.35
CEP290O15078 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 AC097065.1-201ENST00000425737 517 ntBASIC17.23■□□□□ 0.35
CEP290O15078 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.23■□□□□ 0.35
CEP290O15078 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.23■□□□□ 0.35
CEP290O15078 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 U82695.1-201ENST00000635752 1889 ntBASIC17.23■□□□□ 0.35
CEP290O15078 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.23■□□□□ 0.35
CEP290O15078 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 AL161670.2-201ENST00000557650 1227 ntBASIC17.23■□□□□ 0.35
CEP290O15078 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 GGT4P-201ENST00000623672 1708 ntBASIC17.23■□□□□ 0.35
CEP290O15078 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
CEP290O15078 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CEP290O15078 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.22■□□□□ 0.35
CEP290O15078 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CEP290O15078 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 AC116353.5-201ENST00000638148 1699 ntBASIC17.22■□□□□ 0.35
CEP290O15078 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.22■□□□□ 0.35
CEP290O15078 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CEP290O15078 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 AC107373.2-201ENST00000607735 490 ntBASIC17.22■□□□□ 0.35
CEP290O15078 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.22■□□□□ 0.35
CEP290O15078 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CEP290O15078 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CEP290O15078 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.22■□□□□ 0.35
CEP290O15078 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 ACTG1P2-201ENST00000415776 1125 ntBASIC17.22■□□□□ 0.35
CEP290O15078 ACTG1P11-201ENST00000425411 1125 ntBASIC17.22■□□□□ 0.35
CEP290O15078 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CEP290O15078 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.22■□□□□ 0.35
CEP290O15078 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.21■□□□□ 0.35
CEP290O15078 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.21■□□□□ 0.35
CEP290O15078 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.21■□□□□ 0.35
CEP290O15078 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
CEP290O15078 GPAA1P2-202ENST00000606848 1787 ntBASIC17.21■□□□□ 0.35
CEP290O15078 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.21■□□□□ 0.35
CEP290O15078 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CEP290O15078 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CEP290O15078 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms