Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.37■□□□□ 0.69
SEMA3EO15041 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.37■□□□□ 0.69
SEMA3EO15041 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SEMA3EO15041 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.37■□□□□ 0.69
SEMA3EO15041 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.37■□□□□ 0.69
SEMA3EO15041 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.37■□□□□ 0.69
SEMA3EO15041 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.37■□□□□ 0.69
SEMA3EO15041 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SEMA3EO15041 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SEMA3EO15041 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.37■□□□□ 0.69
SEMA3EO15041 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.37■□□□□ 0.69
SEMA3EO15041 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.37■□□□□ 0.69
SEMA3EO15041 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.37■□□□□ 0.69
SEMA3EO15041 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.37■□□□□ 0.69
SEMA3EO15041 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.37■□□□□ 0.69
SEMA3EO15041 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.37■□□□□ 0.69
SEMA3EO15041 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SEMA3EO15041 AC093726.1-201ENST00000608064 963 ntBASIC19.37■□□□□ 0.69
SEMA3EO15041 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 AC007431.3-201ENST00000623221 587 ntBASIC19.37■□□□□ 0.69
SEMA3EO15041 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SEMA3EO15041 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SEMA3EO15041 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SEMA3EO15041 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SEMA3EO15041 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
SEMA3EO15041 AP006294.1-201ENST00000415407 339 ntBASIC19.36■□□□□ 0.69
SEMA3EO15041 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 TARDBPP1-201ENST00000442013 1203 ntBASIC19.36■□□□□ 0.69
SEMA3EO15041 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.36■□□□□ 0.69
SEMA3EO15041 PHKG1P2-201ENST00000457537 863 ntBASIC19.36■□□□□ 0.69
SEMA3EO15041 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.36■□□□□ 0.69
SEMA3EO15041 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.36■□□□□ 0.69
SEMA3EO15041 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.36■□□□□ 0.69
SEMA3EO15041 AL391069.4-201ENST00000609583 481 ntBASIC19.36■□□□□ 0.69
SEMA3EO15041 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
SEMA3EO15041 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SEMA3EO15041 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SEMA3EO15041 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SEMA3EO15041 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.36■□□□□ 0.69
SEMA3EO15041 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.35■□□□□ 0.69
SEMA3EO15041 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
SEMA3EO15041 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SEMA3EO15041 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.35■□□□□ 0.69
SEMA3EO15041 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SEMA3EO15041 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 AC074338.1-201ENST00000416825 156 ntBASIC19.35■□□□□ 0.69
SEMA3EO15041 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.35■□□□□ 0.69
SEMA3EO15041 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.35■□□□□ 0.69
SEMA3EO15041 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.35■□□□□ 0.69
SEMA3EO15041 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.35■□□□□ 0.69
SEMA3EO15041 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.35■□□□□ 0.69
SEMA3EO15041 LINC01115-203ENST00000606068 577 ntBASIC19.35■□□□□ 0.69
SEMA3EO15041 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.35■□□□□ 0.69
SEMA3EO15041 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SEMA3EO15041 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.35■□□□□ 0.69
SEMA3EO15041 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SEMA3EO15041 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SEMA3EO15041 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.35■□□□□ 0.69
SEMA3EO15041 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SEMA3EO15041 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
SEMA3EO15041 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms