Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC22■■□□□ 1.11
CHD2O14647 NOC2LP2-201ENST00000407594 1944 ntBASIC22■■□□□ 1.11
CHD2O14647 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC22■■□□□ 1.11
CHD2O14647 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC22■■□□□ 1.11
CHD2O14647 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC22■■□□□ 1.11
CHD2O14647 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC22■■□□□ 1.11
CHD2O14647 SPTLC1P5-201ENST00000450718 252 ntBASIC22■■□□□ 1.11
CHD2O14647 RNA5SP486-201ENST00000515961 83 ntBASIC22■■□□□ 1.11
CHD2O14647 AC022217.1-201ENST00000521069 738 ntBASIC22■■□□□ 1.11
CHD2O14647 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC22■■□□□ 1.11
CHD2O14647 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC22■■□□□ 1.11
CHD2O14647 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHD2O14647 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CHD2O14647 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CHD2O14647 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC21.99■■□□□ 1.11
CHD2O14647 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC21.99■■□□□ 1.11
CHD2O14647 FTLP1-201ENST00000449155 526 ntBASIC21.99■■□□□ 1.11
CHD2O14647 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC21.99■■□□□ 1.11
CHD2O14647 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CHD2O14647 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC21.99■■□□□ 1.11
CHD2O14647 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
CHD2O14647 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.99■■□□□ 1.11
CHD2O14647 AC007274.2-201ENST00000421675 662 ntBASIC21.99■■□□□ 1.11
CHD2O14647 PTPA-218ENST00000435132 618 ntTSL 2 BASIC21.99■■□□□ 1.11
CHD2O14647 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 AC126915.1-201ENST00000522847 1038 ntBASIC21.99■■□□□ 1.11
CHD2O14647 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC21.99■■□□□ 1.11
CHD2O14647 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.99■■□□□ 1.11
CHD2O14647 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.99■■□□□ 1.11
CHD2O14647 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHD2O14647 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.98■■□□□ 1.11
CHD2O14647 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC21.98■■□□□ 1.11
CHD2O14647 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC21.98■■□□□ 1.11
CHD2O14647 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.98■■□□□ 1.11
CHD2O14647 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.98■■□□□ 1.11
CHD2O14647 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
CHD2O14647 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC21.98■■□□□ 1.11
CHD2O14647 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.98■■□□□ 1.11
CHD2O14647 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 FGFR3P5-201ENST00000564496 886 ntBASIC21.98■■□□□ 1.11
CHD2O14647 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC21.98■■□□□ 1.11
CHD2O14647 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.98■■□□□ 1.11
CHD2O14647 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHD2O14647 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.98■■□□□ 1.11
CHD2O14647 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.98■■□□□ 1.11
CHD2O14647 AC141586.5-201ENST00000624546 2050 ntBASIC21.97■■□□□ 1.11
CHD2O14647 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.97■■□□□ 1.11
CHD2O14647 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CHD2O14647 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CHD2O14647 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CHD2O14647 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC21.97■■□□□ 1.11
CHD2O14647 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC21.97■■□□□ 1.11
CHD2O14647 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
CHD2O14647 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC21.97■■□□□ 1.11
CHD2O14647 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
CHD2O14647 ETV2-208ENST00000621247 941 ntTSL 5 BASIC21.97■■□□□ 1.11
CHD2O14647 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CHD2O14647 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms