Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KRT16P5-201ENST00000455284 522 ntBASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC073648.6-201ENST00000641589 218 ntBASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC124016.1-201ENST00000609552 612 ntBASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms