Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AL138828.2-201ENST00000615812 383 ntBASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 SPDYE12P-201ENST00000618416 771 ntBASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AL590560.3-201ENST00000623350 461 ntBASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 LINC01144-201ENST00000626198 1710 ntBASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA3F8WFD2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 ALOX12P2-203ENST00000570921 1945 ntBASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 FAM220BP-201ENST00000377689 816 ntBASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 FAM207CP-201ENST00000443486 507 ntBASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 AC008761.3-201ENST00000624803 892 ntBASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 AC099398.1-201ENST00000567919 2776 ntBASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA3F8WFD2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NPIPA3F8WFD2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms