Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 RPL13AP23-201ENST00000480739 586 ntBASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 MIR4321-201ENST00000592276 80 ntBASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 AC092865.6-201ENST00000642101 219 ntBASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV7S3A2A0A539 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 WASH6P-202ENST00000359512 1437 ntBASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 PRYP6-201ENST00000514804 343 ntBASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 AP002472.1-201ENST00000577490 586 ntBASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 AL365330.1-201ENST00000607459 531 ntBASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV7S3A2A0A539 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 AC245100.5-201ENST00000452108 331 ntBASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 AC099522.2-201ENST00000607001 744 ntBASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 AC011477.6-201ENST00000604980 1927 ntBASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TCRBV7S3A2A0A539 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TCRBV7S3A2A0A539 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
TCRBV7S3A2A0A539 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.46■□□□□ 0.22
TCRBV7S3A2A0A539 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.46■□□□□ 0.22
TCRBV7S3A2A0A539 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TCRBV7S3A2A0A539 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TCRBV7S3A2A0A539 IL9RP2-201ENST00000423948 1312 ntBASIC16.45■□□□□ 0.22
TCRBV7S3A2A0A539 PMS2P7-201ENST00000506558 1336 ntBASIC16.45■□□□□ 0.22
TCRBV7S3A2A0A539 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms