Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS3ST4Q9Y661 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS3ST4Q9Y661 YBX1P4-201ENST00000392794 808 ntBASIC24.43■■□□□ 1.5
HS3ST4Q9Y661 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
HS3ST4Q9Y661 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HS3ST4Q9Y661 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
HS3ST4Q9Y661 SLC6A10P-202ENST00000431994 2058 ntBASIC24.42■■□□□ 1.5
HS3ST4Q9Y661 AC022616.5-201ENST00000518796 181 ntBASIC24.42■■□□□ 1.5
HS3ST4Q9Y661 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HS3ST4Q9Y661 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HS3ST4Q9Y661 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HS3ST4Q9Y661 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.41■■□□□ 1.5
HS3ST4Q9Y661 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HS3ST4Q9Y661 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.41■■□□□ 1.5
HS3ST4Q9Y661 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
HS3ST4Q9Y661 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.41■■□□□ 1.5
HS3ST4Q9Y661 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HS3ST4Q9Y661 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
HS3ST4Q9Y661 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HS3ST4Q9Y661 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HS3ST4Q9Y661 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
HS3ST4Q9Y661 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.39■■□□□ 1.5
HS3ST4Q9Y661 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
HS3ST4Q9Y661 AC103724.3-201ENST00000564481 992 ntBASIC24.39■■□□□ 1.49
HS3ST4Q9Y661 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.39■■□□□ 1.49
HS3ST4Q9Y661 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
HS3ST4Q9Y661 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.38■■□□□ 1.49
HS3ST4Q9Y661 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.37■■□□□ 1.49
HS3ST4Q9Y661 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HS3ST4Q9Y661 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HS3ST4Q9Y661 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
HS3ST4Q9Y661 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
HS3ST4Q9Y661 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
HS3ST4Q9Y661 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
HS3ST4Q9Y661 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
HS3ST4Q9Y661 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.33■■□□□ 1.49
HS3ST4Q9Y661 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
HS3ST4Q9Y661 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HS3ST4Q9Y661 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HS3ST4Q9Y661 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
HS3ST4Q9Y661 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.33■■□□□ 1.49
HS3ST4Q9Y661 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
HS3ST4Q9Y661 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.32■■□□□ 1.48
HS3ST4Q9Y661 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
HS3ST4Q9Y661 AC120024.1-201ENST00000562672 995 ntBASIC24.32■■□□□ 1.48
HS3ST4Q9Y661 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.32■■□□□ 1.48
HS3ST4Q9Y661 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.32■■□□□ 1.48
HS3ST4Q9Y661 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 AC020928.2-201ENST00000588717 2197 ntBASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 AL031848.2-201ENST00000607670 837 ntBASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
HS3ST4Q9Y661 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HS3ST4Q9Y661 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
HS3ST4Q9Y661 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.3■■□□□ 1.48
HS3ST4Q9Y661 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
HS3ST4Q9Y661 KRT18P24-201ENST00000344739 1156 ntBASIC24.3■■□□□ 1.48
HS3ST4Q9Y661 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms