Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP4-4Q9BYR3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 DEFT1P-201ENST00000453425 496 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 RNASEH2B-AS1-201ENST00000454605 1007 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 MRPL22P1-201ENST00000505398 616 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC100861.2-201ENST00000511929 1125 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AL117351.2-201ENST00000513571 157 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 MTND1P36-201ENST00000522384 936 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 BOLA3P1-201ENST00000530713 355 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC060766.1-201ENST00000590824 627 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC012557.2-201ENST00000605919 418 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC044849.2-201ENST00000606596 710 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC122108.2-201ENST00000611946 526 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC016911.1-201ENST00000613297 452 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC097478.3-201ENST00000620420 872 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 MIR6090-201ENST00000622481 60 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 AC120057.4-201ENST00000624722 1615 ntBASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP4-4Q9BYR3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC012321.1-201ENST00000561622 1588 ntBASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 IL36G-201ENST00000259205 1195 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 NPM1P10-201ENST00000398310 865 ntBASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC234781.2-201ENST00000426370 994 ntBASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC060788.1-201ENST00000521318 469 ntBASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AP001793.2-201ENST00000580267 780 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC021231.2-201ENST00000594613 730 ntBASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AL161912.3-201ENST00000605404 628 ntBASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AC093390.2-202ENST00000638236 976 ntTSL 5 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRTAP4-4Q9BYR3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 500.7 ms