Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL13Q99616 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL13Q99616 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL13Q99616 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCL13Q99616 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.75■□□□□ 0.75
CCL13Q99616 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL13Q99616 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL13Q99616 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.75■□□□□ 0.75
CCL13Q99616 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL13Q99616 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL13Q99616 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.75■□□□□ 0.75
CCL13Q99616 FOXO3B-201ENST00000395675 1928 ntBASIC19.74■□□□□ 0.75
CCL13Q99616 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL13Q99616 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL13Q99616 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL13Q99616 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL13Q99616 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL13Q99616 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL13Q99616 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL13Q99616 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL13Q99616 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL13Q99616 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCL13Q99616 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCL13Q99616 AC020928.2-201ENST00000588717 2197 ntBASIC19.74■□□□□ 0.75
CCL13Q99616 SLC6A10P-202ENST00000431994 2058 ntBASIC19.74■□□□□ 0.75
CCL13Q99616 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL13Q99616 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL13Q99616 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL13Q99616 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL13Q99616 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.73■□□□□ 0.75
CCL13Q99616 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL13Q99616 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.73■□□□□ 0.75
CCL13Q99616 AC019171.1-201ENST00000601251 1056 ntBASIC19.73■□□□□ 0.75
CCL13Q99616 KRT8P33-201ENST00000508125 1423 ntBASIC19.73■□□□□ 0.75
CCL13Q99616 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.72■□□□□ 0.75
CCL13Q99616 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL13Q99616 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.72■□□□□ 0.75
CCL13Q99616 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL13Q99616 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL13Q99616 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.71■□□□□ 0.75
CCL13Q99616 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCL13Q99616 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL13Q99616 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.71■□□□□ 0.75
CCL13Q99616 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL13Q99616 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL13Q99616 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCL13Q99616 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL13Q99616 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
CCL13Q99616 AL592295.1-201ENST00000400984 884 ntBASIC19.7■□□□□ 0.74
CCL13Q99616 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.7■□□□□ 0.74
CCL13Q99616 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.7■□□□□ 0.74
CCL13Q99616 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL13Q99616 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.7■□□□□ 0.74
CCL13Q99616 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL13Q99616 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCL13Q99616 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL13Q99616 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCL13Q99616 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCL13Q99616 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCL13Q99616 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCL13Q99616 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL13Q99616 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCL13Q99616 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.69■□□□□ 0.74
CCL13Q99616 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCL13Q99616 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL13Q99616 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL13Q99616 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.69■□□□□ 0.74
CCL13Q99616 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL13Q99616 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCL13Q99616 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL13Q99616 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL13Q99616 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.68■□□□□ 0.74
CCL13Q99616 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL13Q99616 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCL13Q99616 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCL13Q99616 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CCL13Q99616 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCL13Q99616 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCL13Q99616 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL13Q99616 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
CCL13Q99616 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.67■□□□□ 0.74
CCL13Q99616 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCL13Q99616 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCL13Q99616 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL13Q99616 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCL13Q99616 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCL13Q99616 YBX1P4-201ENST00000392794 808 ntBASIC19.66■□□□□ 0.74
CCL13Q99616 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms