Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM54Q969K7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM54Q969K7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM54Q969K7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM54Q969K7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM54Q969K7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM54Q969K7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM54Q969K7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM54Q969K7 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM54Q969K7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.87■□□□□ 0.93
TMEM54Q969K7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TMEM54Q969K7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM54Q969K7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 LONRF2P2-201ENST00000439212 571 ntBASIC20.86■□□□□ 0.93
TMEM54Q969K7 MIR6089-201ENST00000616698 64 ntBASIC20.86■□□□□ 0.93
TMEM54Q969K7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM54Q969K7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TMEM54Q969K7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM54Q969K7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM54Q969K7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM54Q969K7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM54Q969K7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEM54Q969K7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM54Q969K7 AP003733.4-201ENST00000623785 1697 ntBASIC20.85■□□□□ 0.93
TMEM54Q969K7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.84■□□□□ 0.93
TMEM54Q969K7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM54Q969K7 TSPY13P-201ENST00000338964 914 ntBASIC20.84■□□□□ 0.93
TMEM54Q969K7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM54Q969K7 AC012354.3-201ENST00000623734 483 ntBASIC20.84■□□□□ 0.93
TMEM54Q969K7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM54Q969K7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.84■□□□□ 0.93
TMEM54Q969K7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM54Q969K7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM54Q969K7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM54Q969K7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM54Q969K7 AC139795.1-202ENST00000500444 432 ntBASIC20.83■□□□□ 0.93
TMEM54Q969K7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM54Q969K7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM54Q969K7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM54Q969K7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM54Q969K7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.82■□□□□ 0.92
TMEM54Q969K7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
TMEM54Q969K7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM54Q969K7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TMEM54Q969K7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM54Q969K7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM54Q969K7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM54Q969K7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM54Q969K7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM54Q969K7 AL592295.1-201ENST00000400984 884 ntBASIC20.81■□□□□ 0.92
TMEM54Q969K7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM54Q969K7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM54Q969K7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM54Q969K7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMEM54Q969K7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMEM54Q969K7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM54Q969K7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TMEM54Q969K7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM54Q969K7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TMEM54Q969K7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM54Q969K7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.8■□□□□ 0.92
TMEM54Q969K7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM54Q969K7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.8■□□□□ 0.92
TMEM54Q969K7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM54Q969K7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.8■□□□□ 0.92
TMEM54Q969K7 AC019171.1-201ENST00000601251 1056 ntBASIC20.8■□□□□ 0.92
TMEM54Q969K7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TMEM54Q969K7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM54Q969K7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.79■□□□□ 0.92
TMEM54Q969K7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.79■□□□□ 0.92
TMEM54Q969K7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.79■□□□□ 0.92
TMEM54Q969K7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM54Q969K7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMEM54Q969K7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TMEM54Q969K7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM54Q969K7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.78■□□□□ 0.92
TMEM54Q969K7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM54Q969K7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.78■□□□□ 0.92
TMEM54Q969K7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM54Q969K7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM54Q969K7 AL033527.3-201ENST00000566366 1196 ntBASIC20.77■□□□□ 0.92
TMEM54Q969K7 BHLHE23-202ENST00000612929 1109 ntBASIC20.77■□□□□ 0.92
TMEM54Q969K7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM54Q969K7 AC074183.2-201ENST00000623112 922 ntBASIC20.77■□□□□ 0.92
TMEM54Q969K7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM54Q969K7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM54Q969K7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms