Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 UNC93B8-201ENST00000511903 705 ntBASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 FOXO3B-201ENST00000395675 1928 ntBASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 AC092803.2-201ENST00000564287 1899 ntBASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC9BQ8N6N2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
TTC9BQ8N6N2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TTC9BQ8N6N2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.97■■□□□ 1.59
TTC9BQ8N6N2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC9BQ8N6N2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
TTC9BQ8N6N2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
TTC9BQ8N6N2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
TTC9BQ8N6N2 AC021242.3-201ENST00000607598 1377 ntBASIC24.95■■□□□ 1.59
TTC9BQ8N6N2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC9BQ8N6N2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
TTC9BQ8N6N2 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.95■■□□□ 1.58
TTC9BQ8N6N2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.95■■□□□ 1.58
TTC9BQ8N6N2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC9BQ8N6N2 AC097639.1-201ENST00000565519 1891 ntBASIC24.94■■□□□ 1.58
TTC9BQ8N6N2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TTC9BQ8N6N2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TTC9BQ8N6N2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.94■■□□□ 1.58
TTC9BQ8N6N2 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.94■■□□□ 1.58
TTC9BQ8N6N2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.94■■□□□ 1.58
TTC9BQ8N6N2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.93■■□□□ 1.58
TTC9BQ8N6N2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 TSPY9P-201ENST00000440215 945 ntBASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 TSPY11P-201ENST00000442607 1045 ntBASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.92■■□□□ 1.58
TTC9BQ8N6N2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 AC011551.1-201ENST00000614101 683 ntBASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC9BQ8N6N2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
TTC9BQ8N6N2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TTC9BQ8N6N2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
TTC9BQ8N6N2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.89■■□□□ 1.58
TTC9BQ8N6N2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.89■■□□□ 1.58
TTC9BQ8N6N2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
TTC9BQ8N6N2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.89■■□□□ 1.58
TTC9BQ8N6N2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.89■■□□□ 1.57
TTC9BQ8N6N2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
TTC9BQ8N6N2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.88■■□□□ 1.57
TTC9BQ8N6N2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
TTC9BQ8N6N2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TTC9BQ8N6N2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms