Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 AC137630.3-201ENST00000607245 391 ntBASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
BRD3OSQ6XYD6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 TSPY9P-201ENST00000440215 945 ntBASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 TSPY11P-201ENST00000442607 1045 ntBASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRD3OSQ6XYD6 FOXO3B-201ENST00000395675 1928 ntBASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRD3OSQ6XYD6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
BRD3OSQ6XYD6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.17■□□□□ 0.66
BRD3OSQ6XYD6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD3OSQ6XYD6 UNC93B8-201ENST00000511903 705 ntBASIC19.17■□□□□ 0.66
BRD3OSQ6XYD6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRD3OSQ6XYD6 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.17■□□□□ 0.66
BRD3OSQ6XYD6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BRD3OSQ6XYD6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRD3OSQ6XYD6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.16■□□□□ 0.66
BRD3OSQ6XYD6 AC011551.1-201ENST00000614101 683 ntBASIC19.16■□□□□ 0.66
BRD3OSQ6XYD6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BRD3OSQ6XYD6 AC021242.3-201ENST00000607598 1377 ntBASIC19.16■□□□□ 0.66
BRD3OSQ6XYD6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 KRT16P3-201ENST00000439127 1283 ntBASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BRD3OSQ6XYD6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.14■□□□□ 0.66
BRD3OSQ6XYD6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
BRD3OSQ6XYD6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
BRD3OSQ6XYD6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 AC097639.1-201ENST00000565519 1891 ntBASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 AC010501.1-201ENST00000606270 1962 ntBASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 AC092803.2-201ENST00000564287 1899 ntBASIC19.14■□□□□ 0.65
BRD3OSQ6XYD6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.13■□□□□ 0.65
BRD3OSQ6XYD6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.13■□□□□ 0.65
BRD3OSQ6XYD6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRD3OSQ6XYD6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BRD3OSQ6XYD6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
BRD3OSQ6XYD6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BRD3OSQ6XYD6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.12■□□□□ 0.65
BRD3OSQ6XYD6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 AC092028.1-203ENST00000608262 953 ntBASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
BRD3OSQ6XYD6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRD3OSQ6XYD6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms