Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC093323.1-202ENST00000635031 2045 ntBASIC20.48■□□□□ 0.87
SNAI3Q3KNW1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SNAI3Q3KNW1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SNAI3Q3KNW1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI3Q3KNW1 AP003733.4-201ENST00000623785 1697 ntBASIC20.46■□□□□ 0.87
SNAI3Q3KNW1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI3Q3KNW1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI3Q3KNW1 AC018755.3-202ENST00000596210 929 ntBASIC20.46■□□□□ 0.87
SNAI3Q3KNW1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI3Q3KNW1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SNAI3Q3KNW1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 DUX4L9-201ENST00000449051 1259 ntBASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.45■□□□□ 0.86
SNAI3Q3KNW1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.44■□□□□ 0.86
SNAI3Q3KNW1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAI3Q3KNW1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.44■□□□□ 0.86
SNAI3Q3KNW1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNAI3Q3KNW1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.44■□□□□ 0.86
SNAI3Q3KNW1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.44■□□□□ 0.86
SNAI3Q3KNW1 FOXO3B-201ENST00000395675 1928 ntBASIC20.43■□□□□ 0.86
SNAI3Q3KNW1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SNAI3Q3KNW1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SNAI3Q3KNW1 KRT18P60-201ENST00000312876 1297 ntBASIC20.43■□□□□ 0.86
SNAI3Q3KNW1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNAI3Q3KNW1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.43■□□□□ 0.86
SNAI3Q3KNW1 ABHD17AP5-201ENST00000580133 923 ntBASIC20.43■□□□□ 0.86
SNAI3Q3KNW1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 RPS2P7-201ENST00000447334 885 ntBASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 MIR6765-201ENST00000614092 87 ntBASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNAI3Q3KNW1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 AC129492.7-201ENST00000622992 756 ntBASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNAI3Q3KNW1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNAI3Q3KNW1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNAI3Q3KNW1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNAI3Q3KNW1 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.39■□□□□ 0.86
SNAI3Q3KNW1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 MIR6089-201ENST00000616698 64 ntBASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SNAI3Q3KNW1 LINC01124-201ENST00000409786 2117 ntBASIC20.38■□□□□ 0.85
SNAI3Q3KNW1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.38■□□□□ 0.85
SNAI3Q3KNW1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNAI3Q3KNW1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.37■□□□□ 0.85
SNAI3Q3KNW1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAI3Q3KNW1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.37■□□□□ 0.85
SNAI3Q3KNW1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNAI3Q3KNW1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNAI3Q3KNW1 AC087393.1-201ENST00000582896 145 ntBASIC20.37■□□□□ 0.85
SNAI3Q3KNW1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.37■□□□□ 0.85
SNAI3Q3KNW1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 NTF6A-201ENST00000591175 560 ntBASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms