Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCGF3Q3KNV8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCGF3Q3KNV8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.72■□□□□ 0.91
PCGF3Q3KNV8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCGF3Q3KNV8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCGF3Q3KNV8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCGF3Q3KNV8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PCGF3Q3KNV8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCGF3Q3KNV8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCGF3Q3KNV8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCGF3Q3KNV8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.7■□□□□ 0.9
PCGF3Q3KNV8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCGF3Q3KNV8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCGF3Q3KNV8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCGF3Q3KNV8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCGF3Q3KNV8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 TSPY13P-201ENST00000338964 914 ntBASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCGF3Q3KNV8 AC133561.1-201ENST00000568600 2415 ntBASIC20.68■□□□□ 0.9
PCGF3Q3KNV8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF3Q3KNV8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PCGF3Q3KNV8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF3Q3KNV8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF3Q3KNV8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCGF3Q3KNV8 AC129492.7-201ENST00000622992 756 ntBASIC20.68■□□□□ 0.9
PCGF3Q3KNV8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 ATP5G2P3-201ENST00000429083 425 ntBASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.67■□□□□ 0.9
PCGF3Q3KNV8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PCGF3Q3KNV8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
PCGF3Q3KNV8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PCGF3Q3KNV8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCGF3Q3KNV8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCGF3Q3KNV8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
PCGF3Q3KNV8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.66■□□□□ 0.9
PCGF3Q3KNV8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCGF3Q3KNV8 AC004987.1-201ENST00000428627 508 ntBASIC20.65■□□□□ 0.9
PCGF3Q3KNV8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.65■□□□□ 0.9
PCGF3Q3KNV8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCGF3Q3KNV8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.64■□□□□ 0.9
PCGF3Q3KNV8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.64■□□□□ 0.9
PCGF3Q3KNV8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCGF3Q3KNV8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 AL033527.3-201ENST00000566366 1196 ntBASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 AC018755.3-202ENST00000596210 929 ntBASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCGF3Q3KNV8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCGF3Q3KNV8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.62■□□□□ 0.89
PCGF3Q3KNV8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCGF3Q3KNV8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCGF3Q3KNV8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCGF3Q3KNV8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCGF3Q3KNV8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
PCGF3Q3KNV8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms