Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 YHL017WYHL017W 1599 nt5.98□□□□□ -1.45
DNL4Q08387 ECM3YOR092W 1842 nt5.98□□□□□ -1.45
DNL4Q08387 YER010CYER010C 705 nt5.98□□□□□ -1.45
DNL4Q08387 YER186CYER186C 921 nt5.98□□□□□ -1.45
DNL4Q08387 CHS5YLR330W 2016 nt5.98□□□□□ -1.45
DNL4Q08387 MAL11YGR289C 1851 nt5.97□□□□□ -1.45
DNL4Q08387 COG1YGL223C 1254 nt5.97□□□□□ -1.45
DNL4Q08387 GAT4YIR013C 366 nt5.97□□□□□ -1.45
DNL4Q08387 MRS1YIR021W 1092 nt5.97□□□□□ -1.45
DNL4Q08387 ARA2YMR041C 1008 nt5.97□□□□□ -1.45
DNL4Q08387 DAL82YNL314W 768 nt5.97□□□□□ -1.45
DNL4Q08387 ODC2YOR222W 924 nt5.97□□□□□ -1.45
DNL4Q08387 YML082WYML082W 1950 nt5.97□□□□□ -1.45
DNL4Q08387 SFB3YHR098C 2790 nt5.96□□□□□ -1.45
DNL4Q08387 YFL052WYFL052W 1398 nt5.96□□□□□ -1.45
DNL4Q08387 YGL036WYGL036W 2730 nt5.96□□□□□ -1.46
DNL4Q08387 KNH1YDL049C 807 nt5.96□□□□□ -1.46
DNL4Q08387 RME1YGR044C 903 nt5.96□□□□□ -1.46
DNL4Q08387 YGR176WYGR176W 348 nt5.96□□□□□ -1.46
DNL4Q08387 PNP1YLR209C 936 nt5.96□□□□□ -1.46
DNL4Q08387 YPR123CYPR123C 435 nt5.96□□□□□ -1.46
DNL4Q08387 DIA3YDL024C 1407 nt5.96□□□□□ -1.46
DNL4Q08387 TEA1YOR337W 2280 nt5.96□□□□□ -1.46
DNL4Q08387 TNA1YGR260W 1605 nt5.96□□□□□ -1.46
DNL4Q08387 GUP2YPL189W 1830 nt5.95□□□□□ -1.46
DNL4Q08387 VPS1YKR001C 2115 nt5.95□□□□□ -1.46
DNL4Q08387 NUD1YOR373W 2556 nt5.95□□□□□ -1.46
DNL4Q08387 EMW1YNL313C 2715 nt5.95□□□□□ -1.46
DNL4Q08387 YDL057WYDL057W 987 nt5.95□□□□□ -1.46
DNL4Q08387 ATO3YDR384C 828 nt5.95□□□□□ -1.46
DNL4Q08387 SEC20YDR498C 1152 nt5.95□□□□□ -1.46
DNL4Q08387 HSX1tR(CCU)J 72 nt5.95□□□□□ -1.46
DNL4Q08387 VMA16YHR026W 642 nt5.95□□□□□ -1.46
DNL4Q08387 ERG7YHR072W 2196 nt5.95□□□□□ -1.46
DNL4Q08387 CMR1YDL156W 1569 nt5.94□□□□□ -1.46
DNL4Q08387 YCR097W-AYCR097W-A 267 nt5.94□□□□□ -1.46
DNL4Q08387 CWC21YDR482C 408 nt5.94□□□□□ -1.46
DNL4Q08387 RPS2YGL123W 765 nt5.94□□□□□ -1.46
DNL4Q08387 MRPL13YKR006C 795 nt5.94□□□□□ -1.46
DNL4Q08387 STM1YLR150W 822 nt5.94□□□□□ -1.46
DNL4Q08387 HCR1YLR192C 798 nt5.94□□□□□ -1.46
DNL4Q08387 PIN2YOR104W 849 nt5.94□□□□□ -1.46
DNL4Q08387 YBR230W-AYBR230W-A 201 nt5.94□□□□□ -1.46
DNL4Q08387 YMR155WYMR155W 1644 nt5.94□□□□□ -1.46
DNL4Q08387 PRP24YMR268C 1335 nt5.94□□□□□ -1.46
DNL4Q08387 YAP1801YHR161C 1914 nt5.93□□□□□ -1.46
DNL4Q08387 GAA1YLR088W 1845 nt5.93□□□□□ -1.46
DNL4Q08387 LDB18YLL049W 540 nt5.93□□□□□ -1.46
DNL4Q08387 YLR194CYLR194C 765 nt5.93□□□□□ -1.46
DNL4Q08387 ADE13YLR359W 1449 nt5.92□□□□□ -1.46
DNL4Q08387 YER148W-AYER148W-A 579 nt5.92□□□□□ -1.46
DNL4Q08387 YFR052C-AYFR052C-A 306 nt5.92□□□□□ -1.46
DNL4Q08387 KSS1YGR040W 1107 nt5.92□□□□□ -1.46
DNL4Q08387 YKL223WYKL223W 333 nt5.92□□□□□ -1.46
DNL4Q08387 TFS1YLR178C 660 nt5.92□□□□□ -1.46
DNL4Q08387 HSP26YBR072W 645 nt5.92□□□□□ -1.46
DNL4Q08387 VNX1YNL321W 2727 nt5.92□□□□□ -1.46
DNL4Q08387 KDX1YKL161C 1302 nt5.92□□□□□ -1.46
DNL4Q08387 RTT106YNL206C 1368 nt5.92□□□□□ -1.46
DNL4Q08387 TAX4YJL083W 1815 nt5.91□□□□□ -1.46
DNL4Q08387 YJL171CYJL171C 1191 nt5.91□□□□□ -1.46
DNL4Q08387 YJR115WYJR115W 510 nt5.91□□□□□ -1.46
DNL4Q08387 SEC13YLR208W 894 nt5.91□□□□□ -1.46
DNL4Q08387 MLC2YPR188C 492 nt5.91□□□□□ -1.46
DNL4Q08387 ELP3YPL086C 1674 nt5.91□□□□□ -1.46
DNL4Q08387 HSP78YDR258C 2436 nt5.9□□□□□ -1.46
DNL4Q08387 PKC1YBL105C 3456 nt5.9□□□□□ -1.46
DNL4Q08387 CAD1YDR423C 1230 nt5.9□□□□□ -1.46
DNL4Q08387 EFM3YJR129C 1020 nt5.9□□□□□ -1.46
DNL4Q08387 YLR118CYLR118C 684 nt5.9□□□□□ -1.46
DNL4Q08387 SUE1YPR151C 621 nt5.9□□□□□ -1.46
DNL4Q08387 ERC1YHR032W 1746 nt5.9□□□□□ -1.47
DNL4Q08387 ASN1YPR145W 1719 nt5.9□□□□□ -1.47
DNL4Q08387 IRS4YKR019C 1848 nt5.9□□□□□ -1.47
DNL4Q08387 TIM54YJL054W 1437 nt5.9□□□□□ -1.47
DNL4Q08387 GAT1YFL021W 1533 nt5.89□□□□□ -1.47
DNL4Q08387 AAP1YHR047C 2571 nt5.89□□□□□ -1.47
DNL4Q08387 COX26YDR119W-A 201 nt5.89□□□□□ -1.47
DNL4Q08387 YGR182CYGR182C 354 nt5.89□□□□□ -1.47
DNL4Q08387 YLL059CYLL059C 507 nt5.89□□□□□ -1.47
DNL4Q08387 SCO2YBR024W 906 nt5.89□□□□□ -1.47
DNL4Q08387 ERI1YPL096C-A 207 nt5.89□□□□□ -1.47
DNL4Q08387 SOG2YOR353C 2376 nt5.89□□□□□ -1.47
DNL4Q08387 TFC6YDR362C 2019 nt5.89□□□□□ -1.47
DNL4Q08387 SSK22YCR073C 3996 nt5.88□□□□□ -1.47
DNL4Q08387 JIP4YDR475C 2631 nt5.88□□□□□ -1.47
DNL4Q08387 YKL151CYKL151C 1014 nt5.88□□□□□ -1.47
DNL4Q08387 ERG3YLR056W 1098 nt5.88□□□□□ -1.47
DNL4Q08387 KEX2YNL238W 2445 nt5.88□□□□□ -1.47
DNL4Q08387 YJR015WYJR015W 1533 nt5.88□□□□□ -1.47
DNL4Q08387 SET5YHR207C 1581 nt5.88□□□□□ -1.47
DNL4Q08387 YCL041CYCL041C 495 nt5.87□□□□□ -1.47
DNL4Q08387 GSY2YLR258W 2118 nt5.86□□□□□ -1.47
DNL4Q08387 YDL034WYDL034W 345 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)CtN(GUU)C 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)FtN(GUU)F 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)GtN(GUU)G 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)KtN(GUU)K 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)LtN(GUU)L 74 nt5.86□□□□□ -1.47
DNL4Q08387 tN(GUU)N1tN(GUU)N1 74 nt5.86□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms