Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 YAR019W-AYAR019W-A 333 nt5.68□□□□□ -1.5
VPS13Q07878 UGO1YDR470C 1509 nt5.67□□□□□ -1.5
VPS13Q07878 TEF1YPR080W 1377 nt5.67□□□□□ -1.5
VPS13Q07878 TEF2YBR118W 1377 nt5.67□□□□□ -1.5
VPS13Q07878 PSH1YOL054W 1221 nt5.67□□□□□ -1.5
VPS13Q07878 JEM1YJL073W 1938 nt5.66□□□□□ -1.5
VPS13Q07878 SSK22YCR073C 3996 nt5.66□□□□□ -1.5
VPS13Q07878 RPS2YGL123W 765 nt5.66□□□□□ -1.5
VPS13Q07878 PPR1YLR014C 2715 nt5.66□□□□□ -1.5
VPS13Q07878 RAD57YDR004W 1383 nt5.66□□□□□ -1.5
VPS13Q07878 SUT1YGL162W 900 nt5.65□□□□□ -1.5
VPS13Q07878 EFM1YHL039W 1758 nt5.65□□□□□ -1.5
VPS13Q07878 MCH4YOL119C 1506 nt5.65□□□□□ -1.5
VPS13Q07878 YJL068CYJL068C 900 nt5.65□□□□□ -1.5
VPS13Q07878 ALD5YER073W 1563 nt5.65□□□□□ -1.51
VPS13Q07878 BNA6YFR047C 888 nt5.65□□□□□ -1.51
VPS13Q07878 ICE2YIL090W 1476 nt5.65□□□□□ -1.51
VPS13Q07878 TRK2YKR050W 2670 nt5.64□□□□□ -1.51
VPS13Q07878 BUD16YEL029C 939 nt5.63□□□□□ -1.51
VPS13Q07878 YNK1YKL067W 462 nt5.63□□□□□ -1.51
VPS13Q07878 DCI1YOR180C 816 nt5.63□□□□□ -1.51
VPS13Q07878 DIA3YDL024C 1407 nt5.63□□□□□ -1.51
VPS13Q07878 COQ6YGR255C 1440 nt5.63□□□□□ -1.51
VPS13Q07878 SCW4YGR279C 1161 nt5.63□□□□□ -1.51
VPS13Q07878 ACP1YKL192C 378 nt5.62□□□□□ -1.51
VPS13Q07878 YPK2YMR104C 2034 nt5.62□□□□□ -1.51
VPS13Q07878 ALT1YLR089C 1779 nt5.62□□□□□ -1.51
VPS13Q07878 NUD1YOR373W 2556 nt5.61□□□□□ -1.51
VPS13Q07878 TRP5YGL026C 2124 nt5.61□□□□□ -1.51
VPS13Q07878 ERC1YHR032W 1746 nt5.61□□□□□ -1.51
VPS13Q07878 RPL14AYKL006W 417 nt5.61□□□□□ -1.51
VPS13Q07878 YNL217WYNL217W 981 nt5.61□□□□□ -1.51
VPS13Q07878 SNU71YGR013W 1863 nt5.6□□□□□ -1.51
VPS13Q07878 UTP7YER082C 1665 nt5.6□□□□□ -1.51
VPS13Q07878 RFU1YLR073C 603 nt5.6□□□□□ -1.51
VPS13Q07878 MRF1YGL143C 1242 nt5.59□□□□□ -1.51
VPS13Q07878 ROX3YBL093C 663 nt5.59□□□□□ -1.51
VPS13Q07878 YNR048WYNR048W 1182 nt5.59□□□□□ -1.51
VPS13Q07878 ARG8YOL140W 1272 nt5.59□□□□□ -1.51
VPS13Q07878 CKB2YOR039W 777 nt5.59□□□□□ -1.51
VPS13Q07878 STB3YDR169C 1542 nt5.59□□□□□ -1.51
VPS13Q07878 COX5AYNL052W 462 nt5.59□□□□□ -1.51
VPS13Q07878 DMA1YHR115C 1251 nt5.59□□□□□ -1.52
VPS13Q07878 GMH1YKR030W 822 nt5.59□□□□□ -1.52
VPS13Q07878 SPN1YPR133C 1233 nt5.59□□□□□ -1.52
VPS13Q07878 RAT1YOR048C 3021 nt5.59□□□□□ -1.52
VPS13Q07878 RPL15BYMR121C 615 nt5.58□□□□□ -1.52
VPS13Q07878 NSE5YML023C 1671 nt5.58□□□□□ -1.52
VPS13Q07878 MF(ALPHA)2YGL089C 363 nt5.58□□□□□ -1.52
VPS13Q07878 YER137CYER137C 447 nt5.57□□□□□ -1.52
VPS13Q07878 CRP1YHR146W 1398 nt5.57□□□□□ -1.52
VPS13Q07878 GPT2YKR067W 2232 nt5.57□□□□□ -1.52
VPS13Q07878 RME1YGR044C 903 nt5.57□□□□□ -1.52
VPS13Q07878 YLR157W-DYLR157W-D 213 nt5.57□□□□□ -1.52
VPS13Q07878 GAL10YBR019C 2100 nt5.56□□□□□ -1.52
VPS13Q07878 BSC5YNR069C 1470 nt5.56□□□□□ -1.52
VPS13Q07878 YPR195CYPR195C 330 nt5.56□□□□□ -1.52
VPS13Q07878 YDR161WYDR161W 1164 nt5.55□□□□□ -1.52
VPS13Q07878 YNL134CYNL134C 1131 nt5.55□□□□□ -1.52
VPS13Q07878 GPA1YHR005C 1419 nt5.55□□□□□ -1.52
VPS13Q07878 YAP1YML007W 1953 nt5.55□□□□□ -1.52
VPS13Q07878 GAT1YFL021W 1533 nt5.55□□□□□ -1.52
VPS13Q07878 NTG1YAL015C 1200 nt5.54□□□□□ -1.52
VPS13Q07878 VHS2YIL135C 1311 nt5.54□□□□□ -1.52
VPS13Q07878 SUF5tG(CCC)O 72 nt5.54□□□□□ -1.52
VPS13Q07878 SRV2YNL138W 1581 nt5.54□□□□□ -1.52
VPS13Q07878 SPE4YLR146C 903 nt5.54□□□□□ -1.52
VPS13Q07878 SLX5YDL013W 1860 nt5.53□□□□□ -1.52
VPS13Q07878 DFG5YMR238W 1377 nt5.53□□□□□ -1.52
VPS13Q07878 LPL1YOR059C 1353 nt5.53□□□□□ -1.52
VPS13Q07878 SNZ3YFL059W 897 nt5.53□□□□□ -1.52
VPS13Q07878 SNZ2YNL333W 897 nt5.53□□□□□ -1.52
VPS13Q07878 SPS19YNL202W 879 nt5.53□□□□□ -1.52
VPS13Q07878 EFM3YJR129C 1020 nt5.52□□□□□ -1.53
VPS13Q07878 YGL152CYGL152C 678 nt5.52□□□□□ -1.53
VPS13Q07878 DBR1YKL149C 1218 nt5.52□□□□□ -1.53
VPS13Q07878 ECM23YPL021W 564 nt5.52□□□□□ -1.53
VPS13Q07878 PDI1YCL043C 1569 nt5.52□□□□□ -1.53
VPS13Q07878 AFG2YLR397C 2343 nt5.51□□□□□ -1.53
VPS13Q07878 YDL027CYDL027C 1263 nt5.51□□□□□ -1.53
VPS13Q07878 MRL1YPR079W 1146 nt5.5□□□□□ -1.53
VPS13Q07878 YEH1YLL012W 1722 nt5.5□□□□□ -1.53
VPS13Q07878 GEP5YLR091W 882 nt5.5□□□□□ -1.53
VPS13Q07878 MRPL20YKR085C 588 nt5.5□□□□□ -1.53
VPS13Q07878 SFP1YLR403W 2052 nt5.5□□□□□ -1.53
VPS13Q07878 ISC1YER019W 1434 nt5.49□□□□□ -1.53
VPS13Q07878 SER33YIL074C 1410 nt5.49□□□□□ -1.53
VPS13Q07878 NPT1YOR209C 1290 nt5.49□□□□□ -1.53
VPS13Q07878 ATM1YMR301C 2073 nt5.49□□□□□ -1.53
VPS13Q07878 QDR3YBR043C 2070 nt5.49□□□□□ -1.53
VPS13Q07878 APN1YKL114C 1104 nt5.49□□□□□ -1.53
VPS13Q07878 MAP2YBL091C 1266 nt5.49□□□□□ -1.53
VPS13Q07878 FAR10YLR238W 1437 nt5.49□□□□□ -1.53
VPS13Q07878 DRN1YGR093W 1524 nt5.49□□□□□ -1.53
VPS13Q07878 LUC7YDL087C 786 nt5.48□□□□□ -1.53
VPS13Q07878 YAL044W-AYAL044W-A 333 nt5.48□□□□□ -1.53
VPS13Q07878 KIN1YDR122W 3195 nt5.48□□□□□ -1.53
VPS13Q07878 HHY1YEL059W 309 nt5.48□□□□□ -1.53
VPS13Q07878 PEX22YAL055W 543 nt5.48□□□□□ -1.53
VPS13Q07878 NPP1YCR026C 2229 nt5.48□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms