Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 MRP17YKL003C 396 nt6.01□□□□□ -1.45
RPA49Q01080 YKL031WYKL031W 414 nt6.01□□□□□ -1.45
RPA49Q01080 HCR1YLR192C 798 nt6.01□□□□□ -1.45
RPA49Q01080 SNZ2YNL333W 897 nt6.01□□□□□ -1.45
RPA49Q01080 CSC1YLR241W 2349 nt6□□□□□ -1.45
RPA49Q01080 CLB1YGR108W 1416 nt6□□□□□ -1.45
RPA49Q01080 LST8YNL006W 912 nt6□□□□□ -1.45
RPA49Q01080 MRC1YCL061C 3291 nt6□□□□□ -1.45
RPA49Q01080 ATP1YBL099W 1638 nt5.99□□□□□ -1.45
RPA49Q01080 SEC18YBR080C 2277 nt5.99□□□□□ -1.45
RPA49Q01080 NMT1YLR195C 1368 nt5.99□□□□□ -1.45
RPA49Q01080 ARR3YPR201W 1215 nt5.99□□□□□ -1.45
RPA49Q01080 snR82snR82 268 nt5.98□□□□□ -1.45
RPA49Q01080 DON1YDR273W 1098 nt5.98□□□□□ -1.45
RPA49Q01080 JJJ3YJR097W 519 nt5.98□□□□□ -1.45
RPA49Q01080 GFD1YMR255W 567 nt5.98□□□□□ -1.45
RPA49Q01080 NHP6BYBR089C-A 300 nt5.98□□□□□ -1.45
RPA49Q01080 HXT15YDL245C 1704 nt5.98□□□□□ -1.45
RPA49Q01080 HXT16YJR158W 1704 nt5.98□□□□□ -1.45
RPA49Q01080 HXT2YMR011W 1626 nt5.98□□□□□ -1.45
RPA49Q01080 QDR3YBR043C 2070 nt5.98□□□□□ -1.45
RPA49Q01080 AIM17YHL021C 1398 nt5.97□□□□□ -1.45
RPA49Q01080 IDP1YDL066W 1287 nt5.97□□□□□ -1.45
RPA49Q01080 GUS1YGL245W 2127 nt5.97□□□□□ -1.45
RPA49Q01080 QNS1YHR074W 2145 nt5.96□□□□□ -1.45
RPA49Q01080 SRP101YDR292C 1866 nt5.96□□□□□ -1.45
RPA49Q01080 YHR140WYHR140W 720 nt5.96□□□□□ -1.46
RPA49Q01080 YOL131WYOL131W 327 nt5.96□□□□□ -1.46
RPA49Q01080 MRPL36YBR122C 534 nt5.96□□□□□ -1.46
RPA49Q01080 MSS1YMR023C 1581 nt5.96□□□□□ -1.46
RPA49Q01080 CNM67YNL225C 1746 nt5.96□□□□□ -1.46
RPA49Q01080 CLB2YPR119W 1476 nt5.96□□□□□ -1.46
RPA49Q01080 KEX2YNL238W 2445 nt5.95□□□□□ -1.46
RPA49Q01080 SLX5YDL013W 1860 nt5.95□□□□□ -1.46
RPA49Q01080 GIR2YDR152W 798 nt5.95□□□□□ -1.46
RPA49Q01080 YIL055CYIL055C 1884 nt5.95□□□□□ -1.46
RPA49Q01080 RPS15YOL040C 429 nt5.95□□□□□ -1.46
RPA49Q01080 RBD2YPL246C 789 nt5.95□□□□□ -1.46
RPA49Q01080 RPO26YPR187W 468 nt5.95□□□□□ -1.46
RPA49Q01080 ARO10YDR380W 1908 nt5.95□□□□□ -1.46
RPA49Q01080 HSX1tR(CCU)J 72 nt5.94□□□□□ -1.46
RPA49Q01080 DCN1YLR128W 810 nt5.94□□□□□ -1.46
RPA49Q01080 PIN2YOR104W 849 nt5.94□□□□□ -1.46
RPA49Q01080 BUL1YMR275C 2931 nt5.94□□□□□ -1.46
RPA49Q01080 AVO1YOL078W 3531 nt5.93□□□□□ -1.46
RPA49Q01080 RHB1YCR027C 630 nt5.93□□□□□ -1.46
RPA49Q01080 NCS6YGL211W 1080 nt5.93□□□□□ -1.46
RPA49Q01080 BNA5YLR231C 1362 nt5.93□□□□□ -1.46
RPA49Q01080 BRL1YHR036W 1416 nt5.92□□□□□ -1.46
RPA49Q01080 KEL1YHR158C 3495 nt5.92□□□□□ -1.46
RPA49Q01080 YJU2YKL095W 837 nt5.92□□□□□ -1.46
RPA49Q01080 YLR122CYLR122C 378 nt5.92□□□□□ -1.46
RPA49Q01080 YBR230W-AYBR230W-A 201 nt5.92□□□□□ -1.46
RPA49Q01080 SIT1YEL065W 1887 nt5.92□□□□□ -1.46
RPA49Q01080 ESC8YOL017W 2145 nt5.92□□□□□ -1.46
RPA49Q01080 TRK2YKR050W 2670 nt5.91□□□□□ -1.46
RPA49Q01080 COX26YDR119W-A 201 nt5.91□□□□□ -1.46
RPA49Q01080 PGA3YML125C 939 nt5.91□□□□□ -1.46
RPA49Q01080 CYC8YBR112C 2901 nt5.91□□□□□ -1.46
RPA49Q01080 STL1YDR536W 1710 nt5.91□□□□□ -1.46
RPA49Q01080 HSF1YGL073W 2502 nt5.9□□□□□ -1.46
RPA49Q01080 CDC10YCR002C 969 nt5.9□□□□□ -1.46
RPA49Q01080 ADY2YCR010C 852 nt5.9□□□□□ -1.46
RPA49Q01080 YCR097W-AYCR097W-A 267 nt5.9□□□□□ -1.46
RPA49Q01080 CHO1YER026C 831 nt5.9□□□□□ -1.46
RPA49Q01080 EFM4YIL064W 774 nt5.9□□□□□ -1.46
RPA49Q01080 YLR317WYLR317W 435 nt5.9□□□□□ -1.46
RPA49Q01080 YBR284WYBR284W 2394 nt5.9□□□□□ -1.46
RPA49Q01080 CHL4YDR254W 1377 nt5.9□□□□□ -1.47
RPA49Q01080 GYP1YOR070C 1914 nt5.89□□□□□ -1.47
RPA49Q01080 NUD1YOR373W 2556 nt5.89□□□□□ -1.47
RPA49Q01080 HXT17YNR072W 1695 nt5.89□□□□□ -1.47
RPA49Q01080 CBT1YKL208W 816 nt5.89□□□□□ -1.47
RPA49Q01080 DAL82YNL314W 768 nt5.89□□□□□ -1.47
RPA49Q01080 NOP7YGR103W 1818 nt5.89□□□□□ -1.47
RPA49Q01080 TEF1YPR080W 1377 nt5.89□□□□□ -1.47
RPA49Q01080 TEF2YBR118W 1377 nt5.89□□□□□ -1.47
RPA49Q01080 ATG18YFR021W 1503 nt5.89□□□□□ -1.47
RPA49Q01080 TRP1YDR007W 675 nt5.88□□□□□ -1.47
RPA49Q01080 YLL059CYLL059C 507 nt5.88□□□□□ -1.47
RPA49Q01080 PFA3YNL326C 1011 nt5.88□□□□□ -1.47
RPA49Q01080 ECM7YLR443W 1347 nt5.88□□□□□ -1.47
RPA49Q01080 SHE10YGL228W 1734 nt5.88□□□□□ -1.47
RPA49Q01080 YDL034WYDL034W 345 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)CtN(GUU)C 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)FtN(GUU)F 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)GtN(GUU)G 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)KtN(GUU)K 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)LtN(GUU)L 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)N1tN(GUU)N1 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)N2tN(GUU)N2 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)O1tN(GUU)O1 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)O2tN(GUU)O2 74 nt5.87□□□□□ -1.47
RPA49Q01080 tN(GUU)PtN(GUU)P 74 nt5.87□□□□□ -1.47
RPA49Q01080 YGR176WYGR176W 348 nt5.87□□□□□ -1.47
RPA49Q01080 ARG1YOL058W 1263 nt5.87□□□□□ -1.47
RPA49Q01080 RDL2YOR286W 450 nt5.87□□□□□ -1.47
RPA49Q01080 UGO1YDR470C 1509 nt5.87□□□□□ -1.47
RPA49Q01080 ACS1YAL054C 2142 nt5.86□□□□□ -1.47
RPA49Q01080 RMD9YGL107C 1941 nt5.86□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms