Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.55■■□□□ 1.04
CLDN20P56880 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.55■■□□□ 1.04
CLDN20P56880 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN20P56880 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN20P56880 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN20P56880 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN20P56880 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN20P56880 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.55■■□□□ 1.04
CLDN20P56880 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.55■■□□□ 1.04
CLDN20P56880 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLDN20P56880 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLDN20P56880 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
CLDN20P56880 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CLDN20P56880 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLDN20P56880 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN20P56880 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN20P56880 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN20P56880 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN20P56880 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN20P56880 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CLDN20P56880 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN20P56880 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN20P56880 AC096887.2-201ENST00000623443 1957 ntBASIC21.52■■□□□ 1.04
CLDN20P56880 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.52■■□□□ 1.04
CLDN20P56880 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.52■■□□□ 1.04
CLDN20P56880 KRT18P10-201ENST00000388836 1287 ntBASIC21.52■■□□□ 1.04
CLDN20P56880 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.52■■□□□ 1.04
CLDN20P56880 PVT1_1.1-201ENST00000615125 194 ntBASIC21.52■■□□□ 1.04
CLDN20P56880 AC074183.2-201ENST00000623112 922 ntBASIC21.52■■□□□ 1.04
CLDN20P56880 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN20P56880 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN20P56880 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN20P56880 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CLDN20P56880 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN20P56880 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN20P56880 AC010501.1-201ENST00000606270 1962 ntBASIC21.51■■□□□ 1.03
CLDN20P56880 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN20P56880 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN20P56880 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN20P56880 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN20P56880 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN20P56880 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.51■■□□□ 1.03
CLDN20P56880 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.51■■□□□ 1.03
CLDN20P56880 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.51■■□□□ 1.03
CLDN20P56880 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN20P56880 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN20P56880 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN20P56880 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN20P56880 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN20P56880 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN20P56880 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.5■■□□□ 1.03
CLDN20P56880 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.49■■□□□ 1.03
CLDN20P56880 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN20P56880 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN20P56880 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CLDN20P56880 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN20P56880 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN20P56880 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN20P56880 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN20P56880 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN20P56880 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN20P56880 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CLDN20P56880 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN20P56880 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN20P56880 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.47■■□□□ 1.03
CLDN20P56880 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN20P56880 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN20P56880 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN20P56880 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN20P56880 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CLDN20P56880 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN20P56880 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.47■■□□□ 1.03
CLDN20P56880 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN20P56880 KRT8P33-201ENST00000508125 1423 ntBASIC21.46■■□□□ 1.03
CLDN20P56880 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN20P56880 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN20P56880 LONRF2P2-201ENST00000439212 571 ntBASIC21.46■■□□□ 1.03
CLDN20P56880 RARRES2P1-201ENST00000474487 481 ntBASIC21.46■■□□□ 1.03
CLDN20P56880 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN20P56880 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN20P56880 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.45■■□□□ 1.03
CLDN20P56880 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN20P56880 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.45■■□□□ 1.02
CLDN20P56880 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN20P56880 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.45■■□□□ 1.02
CLDN20P56880 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.45■■□□□ 1.02
CLDN20P56880 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.45■■□□□ 1.02
CLDN20P56880 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.45■■□□□ 1.02
CLDN20P56880 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN20P56880 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN20P56880 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN20P56880 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN20P56880 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms