Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.9■■□□□ 1.42
NUBP1P53384 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.9■■□□□ 1.42
NUBP1P53384 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.9■■□□□ 1.42
NUBP1P53384 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NUBP1P53384 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
NUBP1P53384 IRS3P-201ENST00000223076 1006 ntBASIC23.89■■□□□ 1.41
NUBP1P53384 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NUBP1P53384 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NUBP1P53384 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NUBP1P53384 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.89■■□□□ 1.41
NUBP1P53384 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.89■■□□□ 1.41
NUBP1P53384 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.89■■□□□ 1.41
NUBP1P53384 AC092171.4-201ENST00000609130 632 ntBASIC23.89■■□□□ 1.41
NUBP1P53384 CA15P2-201ENST00000611168 834 ntBASIC23.89■■□□□ 1.41
NUBP1P53384 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NUBP1P53384 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NUBP1P53384 AF131216.4-201ENST00000638924 1588 ntBASIC23.88■■□□□ 1.41
NUBP1P53384 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.88■■□□□ 1.41
NUBP1P53384 AL137784.2-201ENST00000607332 1000 ntBASIC23.88■■□□□ 1.41
NUBP1P53384 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NUBP1P53384 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NUBP1P53384 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NUBP1P53384 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.87■■□□□ 1.41
NUBP1P53384 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.87■■□□□ 1.41
NUBP1P53384 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NUBP1P53384 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUBP1P53384 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NUBP1P53384 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUBP1P53384 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUBP1P53384 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NUBP1P53384 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.85■■□□□ 1.41
NUBP1P53384 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NUBP1P53384 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
NUBP1P53384 AC027682.1-201ENST00000562846 899 ntBASIC23.84■■□□□ 1.41
NUBP1P53384 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NUBP1P53384 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NUBP1P53384 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
NUBP1P53384 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUBP1P53384 ID1-201ENST00000376105 1233 ntBASIC23.83■■□□□ 1.41
NUBP1P53384 SNX5-217ENST00000606557 1087 ntBASIC23.83■■□□□ 1.41
NUBP1P53384 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
NUBP1P53384 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUBP1P53384 AC034268.1-201ENST00000441047 882 ntBASIC23.82■■□□□ 1.4
NUBP1P53384 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
NUBP1P53384 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUBP1P53384 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUBP1P53384 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.81■■□□□ 1.4
NUBP1P53384 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
NUBP1P53384 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.81■■□□□ 1.4
NUBP1P53384 AC022517.1-201ENST00000592429 346 ntBASIC23.81■■□□□ 1.4
NUBP1P53384 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
NUBP1P53384 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
NUBP1P53384 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NUBP1P53384 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
NUBP1P53384 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUBP1P53384 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUBP1P53384 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NUBP1P53384 SYT6-210ENST00000641643 1587 ntBASIC23.79■■□□□ 1.4
NUBP1P53384 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
NUBP1P53384 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.79■■□□□ 1.4
NUBP1P53384 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NUBP1P53384 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUBP1P53384 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.78■■□□□ 1.4
NUBP1P53384 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NUBP1P53384 SLC47A1P1-202ENST00000449666 945 ntBASIC23.78■■□□□ 1.4
NUBP1P53384 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.78■■□□□ 1.4
NUBP1P53384 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.78■■□□□ 1.4
NUBP1P53384 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUBP1P53384 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.77■■□□□ 1.4
NUBP1P53384 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NUBP1P53384 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.77■■□□□ 1.4
NUBP1P53384 MIR4767-201ENST00000582827 78 ntBASIC23.77■■□□□ 1.4
NUBP1P53384 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.77■■□□□ 1.4
NUBP1P53384 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NUBP1P53384 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.77■■□□□ 1.4
NUBP1P53384 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUBP1P53384 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUBP1P53384 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.76■■□□□ 1.39
NUBP1P53384 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUBP1P53384 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.76■■□□□ 1.39
NUBP1P53384 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUBP1P53384 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUBP1P53384 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUBP1P53384 AL139393.2-201ENST00000608721 2025 ntBASIC23.76■■□□□ 1.39
NUBP1P53384 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NUBP1P53384 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NUBP1P53384 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.75■■□□□ 1.39
NUBP1P53384 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.75■■□□□ 1.39
NUBP1P53384 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.75■■□□□ 1.39
NUBP1P53384 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.75■■□□□ 1.39
NUBP1P53384 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.75■■□□□ 1.39
NUBP1P53384 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NUBP1P53384 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.74■■□□□ 1.39
NUBP1P53384 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.74■■□□□ 1.39
NUBP1P53384 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NUBP1P53384 AC012183.1-201ENST00000625197 499 ntBASIC23.74■■□□□ 1.39
NUBP1P53384 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUBP1P53384 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NUBP1P53384 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.73■■□□□ 1.39
NUBP1P53384 IKBKGP1-201ENST00000612193 1073 ntBASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms