Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 BRL1YHR036W 1416 nt4.43□□□□□ -1.7
VPS55P47111 YDL057WYDL057W 987 nt4.42□□□□□ -1.7
VPS55P47111 VTC2YFL004W 2487 nt4.42□□□□□ -1.7
VPS55P47111 PYC1YGL062W 3537 nt4.42□□□□□ -1.7
VPS55P47111 PKC1YBL105C 3456 nt4.42□□□□□ -1.7
VPS55P47111 MID1YNL291C 1647 nt4.42□□□□□ -1.7
VPS55P47111 SMF2YHR050W 1650 nt4.41□□□□□ -1.7
VPS55P47111 RHB1YCR027C 630 nt4.41□□□□□ -1.7
VPS55P47111 TKL1YPR074C 2043 nt4.41□□□□□ -1.7
VPS55P47111 YEH1YLL012W 1722 nt4.41□□□□□ -1.7
VPS55P47111 SSK22YCR073C 3996 nt4.4□□□□□ -1.7
VPS55P47111 RET1YOR207C 3450 nt4.4□□□□□ -1.7
VPS55P47111 ATP1YBL099W 1638 nt4.4□□□□□ -1.7
VPS55P47111 HCR1YLR192C 798 nt4.4□□□□□ -1.71
VPS55P47111 TRP3YKL211C 1455 nt4.4□□□□□ -1.71
VPS55P47111 TBF1YPL128C 1689 nt4.39□□□□□ -1.71
VPS55P47111 GIR2YDR152W 798 nt4.39□□□□□ -1.71
VPS55P47111 PIN2YOR104W 849 nt4.39□□□□□ -1.71
VPS55P47111 ODC2YOR222W 924 nt4.39□□□□□ -1.71
VPS55P47111 MPA43YNL249C 1629 nt4.39□□□□□ -1.71
VPS55P47111 BUL1YMR275C 2931 nt4.38□□□□□ -1.71
VPS55P47111 IDP1YDL066W 1287 nt4.38□□□□□ -1.71
VPS55P47111 DCN1YLR128W 810 nt4.38□□□□□ -1.71
VPS55P47111 GFD1YMR255W 567 nt4.38□□□□□ -1.71
VPS55P47111 RRN3YKL125W 1884 nt4.37□□□□□ -1.71
VPS55P47111 EFM4YIL064W 774 nt4.37□□□□□ -1.71
VPS55P47111 GUA1YMR217W 1578 nt4.36□□□□□ -1.71
VPS55P47111 TRK2YKR050W 2670 nt4.36□□□□□ -1.71
VPS55P47111 STL1YDR536W 1710 nt4.36□□□□□ -1.71
VPS55P47111 UBX2YML013W 1755 nt4.36□□□□□ -1.71
VPS55P47111 ADY2YCR010C 852 nt4.36□□□□□ -1.71
VPS55P47111 YCR097W-AYCR097W-A 267 nt4.36□□□□□ -1.71
VPS55P47111 YGR176WYGR176W 348 nt4.36□□□□□ -1.71
VPS55P47111 HSX1tR(CCU)J 72 nt4.36□□□□□ -1.71
VPS55P47111 PGU1YJR153W 1086 nt4.36□□□□□ -1.71
VPS55P47111 TFS1YLR178C 660 nt4.36□□□□□ -1.71
VPS55P47111 DAL82YNL314W 768 nt4.36□□□□□ -1.71
VPS55P47111 RPS15YOL040C 429 nt4.36□□□□□ -1.71
VPS55P47111 YOL131WYOL131W 327 nt4.36□□□□□ -1.71
VPS55P47111 ERI1YPL096C-A 207 nt4.36□□□□□ -1.71
VPS55P47111 QDR3YBR043C 2070 nt4.36□□□□□ -1.71
VPS55P47111 MNN2YBR015C 1794 nt4.35□□□□□ -1.71
VPS55P47111 VCX1YDL128W 1236 nt4.35□□□□□ -1.71
VPS55P47111 COX26YDR119W-A 201 nt4.35□□□□□ -1.71
VPS55P47111 CHO1YER026C 831 nt4.35□□□□□ -1.71
VPS55P47111 PGA3YML125C 939 nt4.35□□□□□ -1.71
VPS55P47111 ECM3YOR092W 1842 nt4.35□□□□□ -1.71
VPS55P47111 VPS1YKR001C 2115 nt4.34□□□□□ -1.71
VPS55P47111 PHO86YJL117W 936 nt4.34□□□□□ -1.71
VPS55P47111 UGO1YDR470C 1509 nt4.34□□□□□ -1.71
VPS55P47111 TAX4YJL083W 1815 nt4.34□□□□□ -1.71
VPS55P47111 DBF4YDR052C 2115 nt4.34□□□□□ -1.71
VPS55P47111 SNT2YGL131C 4212 nt4.34□□□□□ -1.72
VPS55P47111 NUD1YOR373W 2556 nt4.33□□□□□ -1.72
VPS55P47111 CBK1YNL161W 2271 nt4.33□□□□□ -1.72
VPS55P47111 RTT106YNL206C 1368 nt4.33□□□□□ -1.72
VPS55P47111 TRP1YDR007W 675 nt4.33□□□□□ -1.72
VPS55P47111 SYN8YAL014C 768 nt4.33□□□□□ -1.72
VPS55P47111 YLL059CYLL059C 507 nt4.33□□□□□ -1.72
VPS55P47111 YLR317WYLR317W 435 nt4.33□□□□□ -1.72
VPS55P47111 ARG1YOL058W 1263 nt4.33□□□□□ -1.72
VPS55P47111 YBR230W-AYBR230W-A 201 nt4.33□□□□□ -1.72
VPS55P47111 RFA1YAR007C 1866 nt4.32□□□□□ -1.72
VPS55P47111 ASH1YKL185W 1767 nt4.32□□□□□ -1.72
VPS55P47111 SHE10YGL228W 1734 nt4.32□□□□□ -1.72
VPS55P47111 TEF1YPR080W 1377 nt4.32□□□□□ -1.72
VPS55P47111 TEF2YBR118W 1377 nt4.32□□□□□ -1.72
VPS55P47111 CAD1YDR423C 1230 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)CtN(GUU)C 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)FtN(GUU)F 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)GtN(GUU)G 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)KtN(GUU)K 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)LtN(GUU)L 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)N1tN(GUU)N1 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)N2tN(GUU)N2 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)O1tN(GUU)O1 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)O2tN(GUU)O2 74 nt4.32□□□□□ -1.72
VPS55P47111 tN(GUU)PtN(GUU)P 74 nt4.32□□□□□ -1.72
VPS55P47111 YJR115WYJR115W 510 nt4.31□□□□□ -1.72
VPS55P47111 RBD2YPL246C 789 nt4.31□□□□□ -1.72
VPS55P47111 GPT2YKR067W 2232 nt4.31□□□□□ -1.72
VPS55P47111 ABZ1YNR033W 2364 nt4.31□□□□□ -1.72
VPS55P47111 CLP1YOR250C 1338 nt4.3□□□□□ -1.72
VPS55P47111 UTP7YER082C 1665 nt4.3□□□□□ -1.72
VPS55P47111 ARP2YDL029W 1176 nt4.3□□□□□ -1.72
VPS55P47111 YDL034WYDL034W 345 nt4.3□□□□□ -1.72
VPS55P47111 YOL097W-AYOL097W-A 186 nt4.3□□□□□ -1.72
VPS55P47111 ASF2YDL197C 1578 nt4.3□□□□□ -1.72
VPS55P47111 EMW1YNL313C 2715 nt4.3□□□□□ -1.72
VPS55P47111 HSF1YGL073W 2502 nt4.29□□□□□ -1.72
VPS55P47111 ERG7YHR072W 2196 nt4.29□□□□□ -1.72
VPS55P47111 DAL3YIR032C 588 nt4.29□□□□□ -1.72
VPS55P47111 YNR048WYNR048W 1182 nt4.29□□□□□ -1.72
VPS55P47111 UBC4YBR082C 447 nt4.29□□□□□ -1.72
VPS55P47111 YPR195CYPR195C 330 nt4.29□□□□□ -1.72
VPS55P47111 RRT2YBR246W 1164 nt4.29□□□□□ -1.72
VPS55P47111 GEP3YOR205C 1671 nt4.29□□□□□ -1.72
VPS55P47111 BAP2YBR068C 1830 nt4.28□□□□□ -1.72
VPS55P47111 COS9YKL219W 1224 nt4.28□□□□□ -1.72
VPS55P47111 YLR118CYLR118C 684 nt4.28□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms