Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 tD(GUC)L1tD(GUC)L1 72 nt7.69□□□□□ -1.18
TY1A-JR2P47099 tD(GUC)L2tD(GUC)L2 72 nt7.69□□□□□ -1.18
TY1A-JR2P47099 tD(GUC)MtD(GUC)M 72 nt7.69□□□□□ -1.18
TY1A-JR2P47099 tD(GUC)OtD(GUC)O 72 nt7.69□□□□□ -1.18
TY1A-JR2P47099 THI74YDR438W 1113 nt7.69□□□□□ -1.18
TY1A-JR2P47099 FMO1YHR176W 1299 nt7.69□□□□□ -1.18
TY1A-JR2P47099 SYS1YJL004C 612 nt7.69□□□□□ -1.18
TY1A-JR2P47099 YKR070WYKR070W 1059 nt7.69□□□□□ -1.18
TY1A-JR2P47099 YAR028WYAR028W 705 nt7.69□□□□□ -1.18
TY1A-JR2P47099 YOL013W-BYOL013W-B 291 nt7.69□□□□□ -1.18
TY1A-JR2P47099 HXT7YDR342C 1713 nt7.69□□□□□ -1.18
TY1A-JR2P47099 HXT6YDR343C 1713 nt7.69□□□□□ -1.18
TY1A-JR2P47099 PPH3YDR075W 927 nt7.68□□□□□ -1.18
TY1A-JR2P47099 YDR290WYDR290W 330 nt7.68□□□□□ -1.18
TY1A-JR2P47099 RPP1YHR062C 882 nt7.68□□□□□ -1.18
TY1A-JR2P47099 YLR030WYLR030W 792 nt7.68□□□□□ -1.18
TY1A-JR2P47099 MRPL4YLR439W 960 nt7.68□□□□□ -1.18
TY1A-JR2P47099 YNL017CYNL017C 339 nt7.68□□□□□ -1.18
TY1A-JR2P47099 YNL046WYNL046W 519 nt7.68□□□□□ -1.18
TY1A-JR2P47099 YNL146WYNL146W 303 nt7.68□□□□□ -1.18
TY1A-JR2P47099 CDC21YOR074C 915 nt7.68□□□□□ -1.18
TY1A-JR2P47099 HSH49YOR319W 642 nt7.68□□□□□ -1.18
TY1A-JR2P47099 YBR226CYBR226C 411 nt7.68□□□□□ -1.18
TY1A-JR2P47099 PTC6YCR079W 1329 nt7.68□□□□□ -1.18
TY1A-JR2P47099 VPS36YLR417W 1701 nt7.67□□□□□ -1.18
TY1A-JR2P47099 RRT14YIL127C 621 nt7.67□□□□□ -1.18
TY1A-JR2P47099 SNX4YJL036W 1272 nt7.67□□□□□ -1.18
TY1A-JR2P47099 NIT3YLR351C 876 nt7.67□□□□□ -1.18
TY1A-JR2P47099 RIM11YMR139W 1113 nt7.67□□□□□ -1.18
TY1A-JR2P47099 YNL058CYNL058C 951 nt7.67□□□□□ -1.18
TY1A-JR2P47099 SPC29YPL124W 762 nt7.67□□□□□ -1.18
TY1A-JR2P47099 YMC2YBR104W 990 nt7.67□□□□□ -1.18
TY1A-JR2P47099 LDB16YCL005W 771 nt7.67□□□□□ -1.18
TY1A-JR2P47099 ECM27YJR106W 2178 nt7.67□□□□□ -1.18
TY1A-JR2P47099 RAD7YJR052W 1698 nt7.67□□□□□ -1.18
TY1A-JR2P47099 DPL1YDR294C 1770 nt7.66□□□□□ -1.18
TY1A-JR2P47099 PRD1YCL057W 2139 nt7.66□□□□□ -1.18
TY1A-JR2P47099 SNM1YDR478W 597 nt7.66□□□□□ -1.18
TY1A-JR2P47099 IGD1YFR017C 588 nt7.66□□□□□ -1.18
TY1A-JR2P47099 tL(GAG)GtL(GAG)G 82 nt7.66□□□□□ -1.18
TY1A-JR2P47099 YHL019W-AYHL019W-A 594 nt7.66□□□□□ -1.18
TY1A-JR2P47099 IRC19YLL033W 693 nt7.66□□□□□ -1.18
TY1A-JR2P47099 RRN10YBL025W 438 nt7.66□□□□□ -1.18
TY1A-JR2P47099 PGA2YNL149C 390 nt7.66□□□□□ -1.18
TY1A-JR2P47099 ARG1YOL058W 1263 nt7.66□□□□□ -1.18
TY1A-JR2P47099 YBR144CYBR144C 315 nt7.66□□□□□ -1.18
TY1A-JR2P47099 YBR287WYBR287W 1284 nt7.66□□□□□ -1.18
TY1A-JR2P47099 CLG1YGL215W 1359 nt7.66□□□□□ -1.18
TY1A-JR2P47099 SER3YER081W 1410 nt7.66□□□□□ -1.18
TY1A-JR2P47099 RSC58YLR033W 1509 nt7.66□□□□□ -1.18
TY1A-JR2P47099 APJ1YNL077W 1587 nt7.66□□□□□ -1.18
TY1A-JR2P47099 YIL089WYIL089W 618 nt7.65□□□□□ -1.18
TY1A-JR2P47099 HBS1YKR084C 1836 nt7.65□□□□□ -1.18
TY1A-JR2P47099 DUS3YLR401C 2007 nt7.65□□□□□ -1.18
TY1A-JR2P47099 OGG1YML060W 1131 nt7.65□□□□□ -1.18
TY1A-JR2P47099 RPD3YNL330C 1302 nt7.65□□□□□ -1.18
TY1A-JR2P47099 MIM1YOL026C 342 nt7.65□□□□□ -1.18
TY1A-JR2P47099 SKS1YPL026C 1509 nt7.65□□□□□ -1.18
TY1A-JR2P47099 PEP4YPL154C 1218 nt7.65□□□□□ -1.18
TY1A-JR2P47099 DIM1YPL266W 957 nt7.65□□□□□ -1.18
TY1A-JR2P47099 YCL007CYCL007C 393 nt7.65□□□□□ -1.18
TY1A-JR2P47099 BUD22YMR014W 1560 nt7.64□□□□□ -1.19
TY1A-JR2P47099 ERT1YBR239C 1590 nt7.64□□□□□ -1.19
TY1A-JR2P47099 RPT5YOR117W 1305 nt7.64□□□□□ -1.19
TY1A-JR2P47099 YDR018CYDR018C 1191 nt7.64□□□□□ -1.19
TY1A-JR2P47099 MIX14YDR031W 366 nt7.64□□□□□ -1.19
TY1A-JR2P47099 GLE2YER107C 1098 nt7.64□□□□□ -1.19
TY1A-JR2P47099 YGL082WYGL082W 1146 nt7.64□□□□□ -1.19
TY1A-JR2P47099 PDE1YGL248W 1110 nt7.64□□□□□ -1.19
TY1A-JR2P47099 YHR069C-AYHR069C-A 363 nt7.64□□□□□ -1.19
TY1A-JR2P47099 TIM44YIL022W 1296 nt7.64□□□□□ -1.19
TY1A-JR2P47099 MID2YLR332W 1131 nt7.64□□□□□ -1.19
TY1A-JR2P47099 RIF2YLR453C 1188 nt7.64□□□□□ -1.19
TY1A-JR2P47099 POP8YBL018C 402 nt7.64□□□□□ -1.19
TY1A-JR2P47099 YMR103CYMR103C 363 nt7.64□□□□□ -1.19
TY1A-JR2P47099 YOR300WYOR300W 309 nt7.64□□□□□ -1.19
TY1A-JR2P47099 RIB7YBR153W 735 nt7.64□□□□□ -1.19
TY1A-JR2P47099 LPD1YFL018C 1500 nt7.63□□□□□ -1.19
TY1A-JR2P47099 DEF1YKL054C 2217 nt7.63□□□□□ -1.19
TY1A-JR2P47099 PST1YDR055W 1335 nt7.63□□□□□ -1.19
TY1A-JR2P47099 YCR085WYCR085W 354 nt7.63□□□□□ -1.19
TY1A-JR2P47099 YDR010CYDR010C 333 nt7.63□□□□□ -1.19
TY1A-JR2P47099 MOB2YFL034C-B 864 nt7.63□□□□□ -1.19
TY1A-JR2P47099 SRB5YGR104C 924 nt7.63□□□□□ -1.19
TY1A-JR2P47099 MED6YHR058C 888 nt7.63□□□□□ -1.19
TY1A-JR2P47099 PEX2YJL210W 816 nt7.63□□□□□ -1.19
TY1A-JR2P47099 THI11YJR156C 1023 nt7.63□□□□□ -1.19
TY1A-JR2P47099 PRS1YKL181W 1284 nt7.63□□□□□ -1.19
TY1A-JR2P47099 YBL029WYBL029W 1131 nt7.63□□□□□ -1.19
TY1A-JR2P47099 YPL205CYPL205C 345 nt7.63□□□□□ -1.19
TY1A-JR2P47099 YPR172WYPR172W 603 nt7.63□□□□□ -1.19
TY1A-JR2P47099 REF2YDR195W 1602 nt7.63□□□□□ -1.19
TY1A-JR2P47099 SIP5YMR140W 1470 nt7.62□□□□□ -1.19
TY1A-JR2P47099 UTH1YKR042W 1098 nt7.62□□□□□ -1.19
TY1A-JR2P47099 SIC1YLR079W 855 nt7.62□□□□□ -1.19
TY1A-JR2P47099 COQ9YLR201C 783 nt7.62□□□□□ -1.19
TY1A-JR2P47099 CCS1YMR038C 750 nt7.62□□□□□ -1.19
TY1A-JR2P47099 YPR078CYPR078C 1119 nt7.62□□□□□ -1.19
TY1A-JR2P47099 GRX1YCL035C 333 nt7.62□□□□□ -1.19
TY1A-JR2P47099 ATF1YOR377W 1578 nt7.62□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 1126.2 ms