Protein–RNA interactions for Protein: P0CX67

TY1A-GR3, Transposon Ty1-GR3 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-GR3P0CX67 tD(GUC)L1tD(GUC)L1 72 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 tD(GUC)L2tD(GUC)L2 72 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 tD(GUC)MtD(GUC)M 72 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 tD(GUC)OtD(GUC)O 72 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 THI74YDR438W 1113 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 FMO1YHR176W 1299 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 SYS1YJL004C 612 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 YKR070WYKR070W 1059 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 YAR028WYAR028W 705 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 YOL013W-BYOL013W-B 291 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 HXT7YDR342C 1713 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 HXT6YDR343C 1713 nt7.69□□□□□ -1.18
TY1A-GR3P0CX67 PPH3YDR075W 927 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 YDR290WYDR290W 330 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 RPP1YHR062C 882 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 YLR030WYLR030W 792 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 MRPL4YLR439W 960 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 YNL017CYNL017C 339 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 YNL046WYNL046W 519 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 YNL146WYNL146W 303 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 CDC21YOR074C 915 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 HSH49YOR319W 642 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 YBR226CYBR226C 411 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 PTC6YCR079W 1329 nt7.68□□□□□ -1.18
TY1A-GR3P0CX67 VPS36YLR417W 1701 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 RRT14YIL127C 621 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 SNX4YJL036W 1272 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 NIT3YLR351C 876 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 RIM11YMR139W 1113 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 YNL058CYNL058C 951 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 SPC29YPL124W 762 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 YMC2YBR104W 990 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 LDB16YCL005W 771 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 ECM27YJR106W 2178 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 RAD7YJR052W 1698 nt7.67□□□□□ -1.18
TY1A-GR3P0CX67 DPL1YDR294C 1770 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 PRD1YCL057W 2139 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 SNM1YDR478W 597 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 IGD1YFR017C 588 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 tL(GAG)GtL(GAG)G 82 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 YHL019W-AYHL019W-A 594 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 IRC19YLL033W 693 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 RRN10YBL025W 438 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 PGA2YNL149C 390 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 ARG1YOL058W 1263 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 YBR144CYBR144C 315 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 YBR287WYBR287W 1284 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 CLG1YGL215W 1359 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 SER3YER081W 1410 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 RSC58YLR033W 1509 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 APJ1YNL077W 1587 nt7.66□□□□□ -1.18
TY1A-GR3P0CX67 YIL089WYIL089W 618 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 HBS1YKR084C 1836 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 DUS3YLR401C 2007 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 OGG1YML060W 1131 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 RPD3YNL330C 1302 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 MIM1YOL026C 342 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 SKS1YPL026C 1509 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 PEP4YPL154C 1218 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 DIM1YPL266W 957 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 YCL007CYCL007C 393 nt7.65□□□□□ -1.18
TY1A-GR3P0CX67 BUD22YMR014W 1560 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 ERT1YBR239C 1590 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 RPT5YOR117W 1305 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 YDR018CYDR018C 1191 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 MIX14YDR031W 366 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 GLE2YER107C 1098 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 YGL082WYGL082W 1146 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 PDE1YGL248W 1110 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 YHR069C-AYHR069C-A 363 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 TIM44YIL022W 1296 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 MID2YLR332W 1131 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 RIF2YLR453C 1188 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 POP8YBL018C 402 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 YMR103CYMR103C 363 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 YOR300WYOR300W 309 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 RIB7YBR153W 735 nt7.64□□□□□ -1.19
TY1A-GR3P0CX67 LPD1YFL018C 1500 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 DEF1YKL054C 2217 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 PST1YDR055W 1335 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 YCR085WYCR085W 354 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 YDR010CYDR010C 333 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 MOB2YFL034C-B 864 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 SRB5YGR104C 924 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 MED6YHR058C 888 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 PEX2YJL210W 816 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 THI11YJR156C 1023 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 PRS1YKL181W 1284 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 YBL029WYBL029W 1131 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 YPL205CYPL205C 345 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 YPR172WYPR172W 603 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 REF2YDR195W 1602 nt7.63□□□□□ -1.19
TY1A-GR3P0CX67 SIP5YMR140W 1470 nt7.62□□□□□ -1.19
TY1A-GR3P0CX67 UTH1YKR042W 1098 nt7.62□□□□□ -1.19
TY1A-GR3P0CX67 SIC1YLR079W 855 nt7.62□□□□□ -1.19
TY1A-GR3P0CX67 COQ9YLR201C 783 nt7.62□□□□□ -1.19
TY1A-GR3P0CX67 CCS1YMR038C 750 nt7.62□□□□□ -1.19
TY1A-GR3P0CX67 YPR078CYPR078C 1119 nt7.62□□□□□ -1.19
TY1A-GR3P0CX67 GRX1YCL035C 333 nt7.62□□□□□ -1.19
TY1A-GR3P0CX67 ATF1YOR377W 1578 nt7.62□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms