Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.52■■□□□ 1.52
CD48P09326 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.51■■□□□ 1.51
CD48P09326 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CD48P09326 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CD48P09326 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CD48P09326 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CD48P09326 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CD48P09326 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
CD48P09326 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CD48P09326 DUX4L9-201ENST00000449051 1259 ntBASIC24.5■■□□□ 1.51
CD48P09326 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CD48P09326 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CD48P09326 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD48P09326 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.49■■□□□ 1.51
CD48P09326 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CD48P09326 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CD48P09326 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.49■■□□□ 1.51
CD48P09326 KRT18P60-201ENST00000312876 1297 ntBASIC24.48■■□□□ 1.51
CD48P09326 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CD48P09326 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.48■■□□□ 1.51
CD48P09326 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.48■■□□□ 1.51
CD48P09326 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
CD48P09326 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CD48P09326 AP003733.4-201ENST00000623785 1697 ntBASIC24.47■■□□□ 1.51
CD48P09326 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.47■■□□□ 1.51
CD48P09326 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CD48P09326 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CD48P09326 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CD48P09326 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CD48P09326 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CD48P09326 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.46■■□□□ 1.51
CD48P09326 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
CD48P09326 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CD48P09326 AC018755.3-202ENST00000596210 929 ntBASIC24.46■■□□□ 1.51
CD48P09326 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.46■■□□□ 1.51
CD48P09326 AC129492.7-201ENST00000622992 756 ntBASIC24.46■■□□□ 1.51
CD48P09326 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CD48P09326 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.45■■□□□ 1.51
CD48P09326 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.45■■□□□ 1.5
CD48P09326 ABHD17AP5-201ENST00000580133 923 ntBASIC24.45■■□□□ 1.5
CD48P09326 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.45■■□□□ 1.5
CD48P09326 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CD48P09326 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CD48P09326 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CD48P09326 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CD48P09326 FOXO3B-201ENST00000395675 1928 ntBASIC24.45■■□□□ 1.5
CD48P09326 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CD48P09326 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CD48P09326 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CD48P09326 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CD48P09326 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CD48P09326 KRT18P10-201ENST00000388836 1287 ntBASIC24.44■■□□□ 1.5
CD48P09326 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.44■■□□□ 1.5
CD48P09326 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.44■■□□□ 1.5
CD48P09326 RPS2P7-201ENST00000447334 885 ntBASIC24.44■■□□□ 1.5
CD48P09326 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CD48P09326 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CD48P09326 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CD48P09326 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CD48P09326 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CD48P09326 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
CD48P09326 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.43■■□□□ 1.5
CD48P09326 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CD48P09326 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.43■■□□□ 1.5
CD48P09326 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.42■■□□□ 1.5
CD48P09326 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CD48P09326 MIR6765-201ENST00000614092 87 ntBASIC24.42■■□□□ 1.5
CD48P09326 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.42■■□□□ 1.5
CD48P09326 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CD48P09326 LINC01124-201ENST00000409786 2117 ntBASIC24.41■■□□□ 1.5
CD48P09326 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.41■■□□□ 1.5
CD48P09326 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.41■■□□□ 1.5
CD48P09326 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
CD48P09326 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.41■■□□□ 1.5
CD48P09326 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CD48P09326 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CD48P09326 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CD48P09326 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CD48P09326 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CD48P09326 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CD48P09326 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CD48P09326 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.4■■□□□ 1.5
CD48P09326 MIR6089-201ENST00000616698 64 ntBASIC24.4■■□□□ 1.5
CD48P09326 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CD48P09326 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.4■■□□□ 1.5
CD48P09326 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.4■■□□□ 1.5
CD48P09326 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CD48P09326 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.39■■□□□ 1.5
CD48P09326 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CD48P09326 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.39■■□□□ 1.49
CD48P09326 NTF6A-201ENST00000591175 560 ntBASIC24.39■■□□□ 1.49
CD48P09326 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.39■■□□□ 1.49
CD48P09326 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CD48P09326 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
CD48P09326 AC087393.1-201ENST00000582896 145 ntBASIC24.38■■□□□ 1.49
CD48P09326 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CD48P09326 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CD48P09326 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CD48P09326 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
CD48P09326 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms