Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRAF3IP2O43734 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 FOXO3B-201ENST00000395675 1928 ntBASIC21.04■□□□□ 0.96
TRAF3IP2O43734 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 AC004987.1-201ENST00000428627 508 ntBASIC21.04■□□□□ 0.96
TRAF3IP2O43734 ATP5G2P3-201ENST00000429083 425 ntBASIC21.04■□□□□ 0.96
TRAF3IP2O43734 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 DUX4L18-201ENST00000553347 1267 ntBASIC21.04■□□□□ 0.96
TRAF3IP2O43734 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAF3IP2O43734 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP2O43734 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP2O43734 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP2O43734 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.03■□□□□ 0.96
TRAF3IP2O43734 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP2O43734 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAF3IP2O43734 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
TRAF3IP2O43734 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP2O43734 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAF3IP2O43734 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF3IP2O43734 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAF3IP2O43734 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TRAF3IP2O43734 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP2O43734 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP2O43734 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAF3IP2O43734 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAF3IP2O43734 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21■□□□□ 0.95
TRAF3IP2O43734 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP2O43734 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAF3IP2O43734 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21■□□□□ 0.95
TRAF3IP2O43734 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 TSPY13P-201ENST00000338964 914 ntBASIC20.99■□□□□ 0.95
TRAF3IP2O43734 LONRF2P2-201ENST00000439212 571 ntBASIC20.99■□□□□ 0.95
TRAF3IP2O43734 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 MIR6089-201ENST00000616698 64 ntBASIC20.99■□□□□ 0.95
TRAF3IP2O43734 AC012354.3-201ENST00000623734 483 ntBASIC20.99■□□□□ 0.95
TRAF3IP2O43734 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TRAF3IP2O43734 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAF3IP2O43734 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP2O43734 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRAF3IP2O43734 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP2O43734 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRAF3IP2O43734 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP2O43734 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAF3IP2O43734 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAF3IP2O43734 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP2O43734 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP2O43734 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP2O43734 AC139795.1-202ENST00000500444 432 ntBASIC20.96■□□□□ 0.95
TRAF3IP2O43734 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAF3IP2O43734 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAF3IP2O43734 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP2O43734 AP003733.4-201ENST00000623785 1697 ntBASIC20.96■□□□□ 0.95
TRAF3IP2O43734 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP2O43734 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAF3IP2O43734 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP2O43734 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP2O43734 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAF3IP2O43734 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP2O43734 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP2O43734 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP2O43734 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms