Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 AC126177.7-201ENST00000547904 679 ntBASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV6-1A0A0K0K1D8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV6-1A0A0K0K1D8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-1A0A0K0K1D8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-1A0A0K0K1D8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-1A0A0K0K1D8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV6-1A0A0K0K1D8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 HLA-V-202ENST00000446817 847 ntBASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.64■□□□□ 0.41
TRBV6-1A0A0K0K1D8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.63■□□□□ 0.41
TRBV6-1A0A0K0K1D8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV6-1A0A0K0K1D8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV6-1A0A0K0K1D8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV6-1A0A0K0K1D8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ABCB10P4-201ENST00000566803 2184 ntBASIC17.62■□□□□ 0.41
TRBV6-1A0A0K0K1D8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRBV6-1A0A0K0K1D8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV6-1A0A0K0K1D8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV6-1A0A0K0K1D8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms