Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 MIR639-201ENST00000384974 98 ntBASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 MIR219A2-201ENST00000608502 1504 ntBASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-6A0A0B4J262 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
TRAV8-6A0A0B4J262 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 AC126177.7-201ENST00000547904 679 ntBASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV8-6A0A0B4J262 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 SLC25A24-204ENST00000569674 2357 ntBASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-6A0A0B4J262 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-6A0A0B4J262 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 AC142381.3-201ENST00000568208 1670 ntBASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-6A0A0B4J262 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-6A0A0B4J262 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV8-6A0A0B4J262 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-6A0A0B4J262 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV8-6A0A0B4J262 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-6A0A0B4J262 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-6A0A0B4J262 WHAMMP3-201ENST00000611636 1609 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms