Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AL353779.1-201ENST00000434793 351 ntBASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 ZNF890P-202ENST00000530367 1156 ntBASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AL079307.3-201ENST00000556114 283 ntBASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AL596325.1-201ENST00000563991 1082 ntBASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AC026979.3-201ENST00000607315 403 ntBASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSX2IPQ9Y2D8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SSX2IPQ9Y2D8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 RN7SL692P-201ENST00000464677 288 ntBASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 MST1L-201ENST00000442552 2185 ntBASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SSX2IPQ9Y2D8 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AC009407.1-201ENST00000568958 598 ntBASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AL133215.2-201ENST00000609242 977 ntBASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AL844908.2-201ENST00000609461 460 ntBASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 CU639417.3-201ENST00000624240 1404 ntBASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 AC126755.1-201ENST00000525846 6405 ntBASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 MIR600HG-201ENST00000449175 5984 ntBASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SSX2IPQ9Y2D8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSX2IPQ9Y2D8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms