Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH9Q9ULB4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 AC002472.2-201ENST00000442739 958 ntBASIC17.06■□□□□ 0.32
CDH9Q9ULB4 EEF1DP4-201ENST00000446006 880 ntBASIC17.06■□□□□ 0.32
CDH9Q9ULB4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 RN7SL204P-201ENST00000582831 262 ntBASIC17.06■□□□□ 0.32
CDH9Q9ULB4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 AC092364.2-201ENST00000596710 2692 ntBASIC17.06■□□□□ 0.32
CDH9Q9ULB4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH9Q9ULB4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 KRT8P37-201ENST00000451609 1420 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 MIR661-201ENST00000384842 89 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 AC236430.1-201ENST00000402231 743 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 HIST3H2BA-201ENST00000436555 524 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 LINC02560-201ENST00000596379 459 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 AC008738.7-201ENST00000609744 511 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 BNIP3P1-202ENST00000550043 1585 ntBASIC17.05■□□□□ 0.32
CDH9Q9ULB4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH9Q9ULB4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms