Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 REXO1L8P-201ENST00000604378 1897 ntBASIC15.71■□□□□ 0.11
CPNE7Q9UBL6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE7Q9UBL6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.71■□□□□ 0.1
CPNE7Q9UBL6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE7Q9UBL6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE7Q9UBL6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CPNE7Q9UBL6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CPNE7Q9UBL6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 SERBP1P5-201ENST00000510079 1181 ntBASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AC092850.2-201ENST00000623821 2697 ntBASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CPNE7Q9UBL6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 AL136982.4-201ENST00000437689 1740 ntBASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 COX20P2-201ENST00000452636 358 ntBASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 AC008738.7-201ENST00000609744 511 ntBASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 NKILA-202ENST00000614771 2598 ntBASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CPNE7Q9UBL6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CPNE7Q9UBL6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms