Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL596087.1-201ENST00000400979 1969 ntBASIC19.63■□□□□ 0.73
RPAP1Q9BWH6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPAP1Q9BWH6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPAP1Q9BWH6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPAP1Q9BWH6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPAP1Q9BWH6 AC090340.1-201ENST00000620778 4980 ntBASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 REXO1L8P-201ENST00000604378 1897 ntBASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 RN7SL692P-201ENST00000464677 288 ntBASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 AC098859.1-201ENST00000502915 1238 ntBASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 ZNF890P-202ENST00000530367 1156 ntBASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 CETN4P-206ENST00000642099 2168 ntBASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPAP1Q9BWH6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 AC087499.5-201ENST00000452760 1342 ntBASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 AL596325.1-201ENST00000563991 1082 ntBASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPAP1Q9BWH6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 GK-202ENST00000378941 458 ntTSL 3 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 AC008738.7-201ENST00000609744 511 ntBASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 SPTSSB-204ENST00000617024 1292 ntBASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms