Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 REXO1L3P-201ENST00000622202 1288 ntBASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF4Q9BUZ4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 AL603832.2-201ENST00000566195 2125 ntBASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 HLA-A-202ENST00000376806 1854 ntBASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 AC005089.1-201ENST00000619486 2241 ntBASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 AL645939.2-201ENST00000427340 991 ntBASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 AC112191.1-201ENST00000523689 701 ntBASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 AL513210.1-201ENST00000629608 234 ntBASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF4Q9BUZ4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 AC004835.2-201ENST00000603762 682 ntBASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF4Q9BUZ4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms